| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0164 |
|---|
| Symbol | |
|---|
| ID | 4784127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 173719 |
|---|
| End bp | 174981 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640088712 |
|---|
| Product | putative electron transfer oxidoreductase |
|---|
| Protein accession | YP_001019361 |
|---|
| Protein GI | 124265357 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.762503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCTG CTCCGCTGAA CCGCCCGCTC GCCGACCTGC CCCCCGCTTG CGAGGTGCTG
GTGGTCGGTG CCGGCCCGGC CGGCAGCGCG GCGGCCCGCA CGCTGGCGCG CGCTGGCGTC
GATGTGGTGC TGATCGACCA GCAGGCCTTT CCGCGCGACA AGGTCTGTGG CGACGGCCTG
ATTCCCGACG CGCACCGTGC GATGGCGAAG CTGGGCGTGC TCGACGAGGT GATGGCGCTC
GCGCAGCCGG TGAAGCATCT GCGCTGCATC GCGCCGCGCG GCGGGCGCAT CGACGTGCCG
GGCACGCTGG CCGTGCTGCC GCGCCGCCAG CTCGACCTGG TGCTGTGCCG TGCCGCGGCG
GAGGCCGGCG CGCGCATGCA TGCGCCGCTG CGCTTCATCG AACCGCTTGA GGACGCCGGA
CGGGTGGTCG GTGCCCGCCT GCAGGGGCAC GACGAGGCCC GTGCGCCGCG CGAGATCCGC
GCCCGCTGGG TGCTGCTCGC CAGCGGCGCG GTGCCGCAGG CCAGCCTCGC CGCAGGAGTG
TGCGACCGCC GCACACCCAG CGGCGTGGCG TTGCGCGGCT ACGTCAAGAA CGACGCCATG
GTCGGTCGCA TCACCGAGCT CGAGGTGGCG TGGCATCGCC GGCTCAAGCC CGGCTACGGC
TGGATCTTTC CGTGCCGCGA CGGCGTGTTC AACATCGGCG TCGGCGTCGC GCAGAGCCAT
CGACGCGATG CCCTCGGCCG CCACCGCATG CTGGACGTGA ACCTGCGCGA GGTCTTCGCG
GCCTTCACCG AGGTGCACGC GCCGGCACGT GAGCTGATGG AAGGCGGCAC GCTGCTCGGC
GAACTGAAGG GGGCGCCGCT GCGCTGTTCG CTCGAGGGCG CGCGCCGCTC ACGTCCGGGC
CTGCTGGTGG CCGGCGAGGC GGCCGGCAGC ACCTATGCCC TCACCGGCGA AGGCATCGGC
AAGGCGCTCG AGACCGGCGT CCTTGCGGCC GAAGCGGTGA TCGAAGGCCA GCGGCTGTCG
CTCGGTGACG ATGCCGTGCG CGCCCGCTAC GAGGCCGACC TGGCGGCGCT GAAGCCGCGC
TTCGCGATCT ACGAGAAAGC CAGCAGCGTC AACGAGCGCC CCTGGCTCGT CGACCTGCTG
GTGTGGAGCG CCCGGCGCAG CCCGCGTCGC CTGCAGCGCA TGAGCGGCGT GCTCGAGGAG
ACACACACGC CCGCCAACCT GGTGACGGCG CGCAGCTTCC TGAGGATGGT GTTCGAACGC
TGA
|
|---|
| Protein sequence | MHPAPLNRPL ADLPPACEVL VVGAGPAGSA AARTLARAGV DVVLIDQQAF PRDKVCGDGL
IPDAHRAMAK LGVLDEVMAL AQPVKHLRCI APRGGRIDVP GTLAVLPRRQ LDLVLCRAAA
EAGARMHAPL RFIEPLEDAG RVVGARLQGH DEARAPREIR ARWVLLASGA VPQASLAAGV
CDRRTPSGVA LRGYVKNDAM VGRITELEVA WHRRLKPGYG WIFPCRDGVF NIGVGVAQSH
RRDALGRHRM LDVNLREVFA AFTEVHAPAR ELMEGGTLLG ELKGAPLRCS LEGARRSRPG
LLVAGEAAGS TYALTGEGIG KALETGVLAA EAVIEGQRLS LGDDAVRARY EADLAALKPR
FAIYEKASSV NERPWLVDLL VWSARRSPRR LQRMSGVLEE THTPANLVTA RSFLRMVFER
|
|---|
| |