Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0143 |
Symbol | |
ID | 4784844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 149320 |
End bp | 150654 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640088691 |
Product | membrane carboxypeptidase-like protein |
Protein accession | YP_001019340 |
Protein GI | 124265336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00763873 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACA GCGGCCCACT CCGTTCCCCC GCACGCCGCC TCAGCCTCAT CACCTTCGCC CTCCTCGCCA CCCTGCTCGC GCTGACGGCG GCACTCTTCG CCGTGGCCTG CCACGCGCTC GCGCCGCAGC CCGGCGAGTG GTCCCACACG CTGCGCATCG GCCCGCGCGG CTGGCAGATC GTGCGACCGG TCAGCGTGCC GGCGCTGCTG CGCGTGGCGA CGCACCCGCT CGGGCTGGCG CTGCTCGGCG GCCGCAGCAC TGACACGCCG CTCGGCCGCT GGACCTGGCA GCGCGTGGCG CCCGACCGCC TGGCCGGCCG CTGCGCGCCG TGCCTTCTGC CGTTCGACGC GCTGGGGCCG CAGCCACTGC TGCTGCCGCA CGCCGAGCTG CAGCTGCAGC GCGTGGCGCA GGAGCGCTAC CGCGGCACGC TGACGCTCGG CGAGGGCGAG CAGGCGGTGG TGCTGAAGGG TCGTGCCCAG CTCACGAGCA CCGGGCTGGT GATCGACGCC GAGCTGGCCG ACACCGCGCT GGCCGATGTC TACGCGGCCT TCGGCCCGGC GGCGATCCCC GAGTTGCGGC GCGCGCACAT CGACGGCCGC GTGGCTGCGA AGCTGAACCT GCGCCTGCCC GAGCGGCGCC TGGTGGTGCA GCCGCGCATC GACGGCTTCG AGGTCAGCGG CCTGGGCACC GAAGCCCTGC TCGATGCCGA ACCGGCTATG GCCTGCGCCG CCGGCGCGCC GCGCCCGGCG GCCGGTGAGG CCGGCACGCG CGTCATCGGC TGGCTGCCGC GCGCGGTGGT GGCGGCCGAG GACCAGCGCT TCGCCGAGCA CGCCGGCTAC GACCTGCCGC AACTGCTGGC CGCGTGGTCG GCCAACCAGA AGCAGCCGCA GCCGACGGCA GCGGGCGGCA CGCGACCGCA GGGCGCGAGC ACGCTGACGC AGCAGCTCGC CAAGCTGGTC TACACCGGTG ACGAGCGTTC GGCGGTGCGC AAGCTGCGCG AGCTGCTCTA CGCGGTGGAG ATGGAGCGCA CGCTCGGCAA GGGCCGCATC CTGCAGCTCT ACCTGGCGAT CGCACCCTGG GGCGAGGGCG TGTGCGGCGC CGAGGCCGCG GCGCGCCACT ACCTGCGCAA GAGCAGCGCG CGGCTCACGC CGCTGGAAGC CGCGTGGCTG GCGAGCCTGC TGCGCGCTGC GCCGGCGCCG GGCGCGATGA CTGCCGTCGA CACCGAGCGC GTGGGCTGGG TCCTGACGAG CCTGCGCGGG CCGCTGCCGG CCGAGCGGCG GGCGGAGCAG ATGGAGGTGT TGCGCAGCGG CTGGCAACCG CCGGCGCGGC GCTGA
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Protein sequence | MKNSGPLRSP ARRLSLITFA LLATLLALTA ALFAVACHAL APQPGEWSHT LRIGPRGWQI VRPVSVPALL RVATHPLGLA LLGGRSTDTP LGRWTWQRVA PDRLAGRCAP CLLPFDALGP QPLLLPHAEL QLQRVAQERY RGTLTLGEGE QAVVLKGRAQ LTSTGLVIDA ELADTALADV YAAFGPAAIP ELRRAHIDGR VAAKLNLRLP ERRLVVQPRI DGFEVSGLGT EALLDAEPAM ACAAGAPRPA AGEAGTRVIG WLPRAVVAAE DQRFAEHAGY DLPQLLAAWS ANQKQPQPTA AGGTRPQGAS TLTQQLAKLV YTGDERSAVR KLRELLYAVE MERTLGKGRI LQLYLAIAPW GEGVCGAEAA ARHYLRKSSA RLTPLEAAWL ASLLRAAPAP GAMTAVDTER VGWVLTSLRG PLPAERRAEQ MEVLRSGWQP PARR
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