Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0077 |
Symbol | |
ID | 4783863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 71330 |
End bp | 72859 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640088624 |
Product | putative transmembrane sensor histidine kinase transcription regulator protein |
Protein accession | YP_001019274 |
Protein GI | 124265270 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.156508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACGC TGCGCGGACA ACGCTCGCTG TTCGGCGAGA TCCTCGACTG GATGCTCGCG CCGCTGCTGT TGCTGTGGCC GATGAGTGTC GCGCTGACCT GGCTGGTCGC CCAGAACATC GCCAACCGTC CCTACGATCG CGCGCTCGGC GAGATGGCGA GGGCGCTGTC GCAGCAGGTA AGCGTCGACC AGGGCCGCGT TGCGTTCGCT CTGCCGCCCG GAGCCGATCA ACTGCTGCGG GCCGACGAGG CGGACCAGAT CTACTTCCAG GTGCTGGGCG CGCGGGGCGA GTATGTGGGT GGCGATCACA CGCTGCCGGT CCCGCGCGAG GACGACGTGG CGGCGGTCGG AGAGGTCCGC TATCGCGACG ACGAGGTGCA CAACGAGGCC GTGCGCGTGG CCTACCTGTG GGTGGCGATG CCCGCCGCGC CGCGGATTCC CGGCGCCACC TCGCCGGCGC TGGTGCAGGT GGCCGAAACC CTGGGCAAGC GCTCGCAGCT GGCCACCGAG ATCATCAAGG GCGTGATCCT GCCGCAGTTC GTGATCCTGC CGCTCGCGGT GCTGCTGGTG TGGCTGGCAC TGGCGCGCGG CATCGCGCCG CTCAACGAGC TGCAGCAGCG CATCCGCCGC CGTGCGGCTG ATGACCTGAG CCCGATCGAC GAGATGGAGG CGCCGGAGGA GGTGTCGCCG CTGGTGCGAG CCATCAACGA CCTGCTGGAG CGCCTGGACC GCTCGCTGGC GACGCAGCGG CGCTTTCTCG CCGATGCCGC CCACCAGCTC AAGACGCCGC TGGCCGGCCT GCGCACCCAG GCCGAGATCG CGCAGCGCGA GATCGACGCG GGTGAACGCG AGCCCGAGGC GCTGAAGCGC TCGCTGCAGC AGATCGCGCT GTCGAGCCAG CGGGCCGCGC ACATGGTCAA CCAGTTGCTG GCGATGGCGC GCGCCGAGGA CCGCGAACTC GCCGCCCGCG TGGCCGAGGT CCGGCTGGCG AGGCTGGCAA CGGAGACCGT CCGCGACTTC GTGCCGCGCG CGCTCGAGAA GCGCATCGAC CTCGGCTACG AGGGACCGGG CGCCGACGGC GAGACGGCCG AGCCGCAGCG CAGCAGCGTG CTCGGCCATG CGCTGCTGCT GCGCGAGATG ATCCGCAACC TGGTCGACAA CGCCCTGCAC TACACCCCTC CCGGAGGCAC GGTGACGGTG AGGGTCGTCA GCGACCCGTT CGGCCAGGTC GTGGTGCTGC AGGTCGAGGA TTCCGGCCCC GGCATCCCCG CGGCGGAGCG TGAACTGGTG TTCCAGCCCT TCTACCGCGC CCTGGGGACC GATGTCGATG GCTCGGGCCT GGGCCTGGCG ATCGTCGCCG AGATCGCTCG ACAGCACGGT GCTACGTTGA CGCTGGACGA CACCCGCGAA GGCCCCGTGC CTGAAGGCAG CAGCCCCGGC GCGCGCTTCA CCGTGCGCTT CGCCGCCTGG CCGGCCGACC GTCTGCCGCG TGCCGCGCCT CTTGCCAGCG GGACGGCCAA CCCGGCTTAG
|
Protein sequence | MNTLRGQRSL FGEILDWMLA PLLLLWPMSV ALTWLVAQNI ANRPYDRALG EMARALSQQV SVDQGRVAFA LPPGADQLLR ADEADQIYFQ VLGARGEYVG GDHTLPVPRE DDVAAVGEVR YRDDEVHNEA VRVAYLWVAM PAAPRIPGAT SPALVQVAET LGKRSQLATE IIKGVILPQF VILPLAVLLV WLALARGIAP LNELQQRIRR RAADDLSPID EMEAPEEVSP LVRAINDLLE RLDRSLATQR RFLADAAHQL KTPLAGLRTQ AEIAQREIDA GEREPEALKR SLQQIALSSQ RAAHMVNQLL AMARAEDREL AARVAEVRLA RLATETVRDF VPRALEKRID LGYEGPGADG ETAEPQRSSV LGHALLLREM IRNLVDNALH YTPPGGTVTV RVVSDPFGQV VVLQVEDSGP GIPAAERELV FQPFYRALGT DVDGSGLGLA IVAEIARQHG ATLTLDDTRE GPVPEGSSPG ARFTVRFAAW PADRLPRAAP LASGTANPA
|
| |