| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0023 |
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| Symbol | |
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| ID | 4785307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 24591 |
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| End bp | 26576 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640088570 |
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| Product | putative cysteine desulfurase |
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| Protein accession | YP_001019220 |
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| Protein GI | 124265216 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.493291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGT CCGATGCCCT GAGCGGCCCG GTCGCGGCGG CGCAGCCCGC GTTGCCGCCC
GGCCTGCCCG ATCCCGCCAC GCTCGCGCGT CTGGCGGGCG AATTCTTCGC CGCGCTGCCC
GGCGACGGCG GCGCCCACGG CGGCGTGCCG GTGCCGGCAC AGCCCACCCC GCCCGGCCTG
TCGCTGCCCG GTGTGCTGAC CGGCGGTCCG GCCACGCCCA ACGTGCTGCC GCTCGGGGCC
GCGGCGCCCG GCGCCAACCT CGTGCCCAGC TCGCCCCAGC ACGCCGCGGC GCACGGTGCG
TCGGCCCCGG CGCTGGTGCC GCATGCGGCC GCGCCGAACG GGCTGCCCGA GCACGTGGCC
ACCCTCCCGC CGACGCTCGA TGGCCGCCTC GGCAGCCACG CCCTCGGCGT GCCGCAGGTC
GTGCCGGCCG CATCGCCGCT GGTCGGGCTG CCGTCGCACC CGTCGGCCGG CGGCGCACCC
GCGGCAACCG ACACGCCATC GCCCTACTAC TTCCTGTCGC ACGCCACGTC CGGACCGGGC
GCGAGCGAGG CGCGCATCGC GCCGCTCGGC AGTGCACCGA CCGGGCTACC GCAGGAGGCC
GACCTGCGCT CGCTGCTGCG CAGCGACGCG CCGTCGTCCG GCAGCGCCCC CGCGGCGTCG
CCCGGCGCCT TCTACTTCCT CGACGCGCAG CGCCATCCCG GGCCGCACGG CAGCCACGCG
GGCGCCGTGC CGAACGCGGC GGCCTCGGCC CATCCGCCGT TCGACGTGCA CGCGATCCGG
CGCGACTTCC CGATCCTGCA GGAGCGCGTC AACGGTCGCC CGCTCGTGTG GTTCGACAAC
GCCGCGACGA CGCACAAGCC GCAGTCGGTG ATCGACCGCA TCGCCCATTT CTACGCGCAC
GAGAACTCCA ACATCCACCG CGCCGCGCAC GAGCTGGCGG CGCGCGCTAC CGACGCCTAC
GAAGGCGCGC GCGAGACGGT GCGGCGCTTC ATCGGCGCGA GCTCGGTGGA AGAGATCGTG
TTCGTGCGCG GCACCACCGA GGCCATCAAC CTGGTGGCCA AGAGCTGGGG CGCGCAGAAC
ATCGGTGCCG GCGACGAGAT CGTGGTCTCG CACCTCGAGC ACCACGCCAA CATCGTGCCG
TGGCAGCAGC TCGCCGCCGA GAAGGGCGCG AAGCTGCGCG TGATCCCGGT CGACGACAGC
GGCCAGGTGC GGCTCGACGA ATACCGCAAG CTGCTGAACG ACCGCACGAA GATCGTCTCG
GTGACGCAGG TGTCCAACGC GCTGGGCACC GTGGTGCCGG TGAAGGAGAT CGTCGAGCTG
GCGCACCGCG CCGGCGCGAA GGCGCTGGTC GACGGCGCGC AGTCGGTCTC GCACCTGCGG
GTGAACGTGC AGGCGCTCGA CGCCGACTTC TTCGTGTTCT CCGGCCACAA GATCTTCGGT
CCCACCGGCA TCGGCGTGGT CTACGGCAAG CGCGAGGTGC TCGAGGACAT GCCCCCGTGG
CAGGGCGGCG GCAACATGAT CGCCGACGTG ACTTTCGAGA AGACGGTCTA CCACGGGCCG
CCGACGCGCT TCGAGGCCGG CACCGGCAAC ATCGCCGACG CGGTGGGCCT GGGCGCGGCG
CTCGACTACG TGGAGCGCGT GGGCATCGAG AACATCGCGC GCTACGAGCA CGACCTGCTC
GACTACGCGA CGCACGCGCT GCGCCCGATC GCCGGCGTAC GGCTGGTGGG CACCGCGCGC
GACAAGGCCA GCGTGCTGTC CTTCGTGCTC GACGGCTACA CGACCGACGA GGTGGGCAAG
GCGCTCAACG AGGAAGGCAT CGCGGTGCGC ACCGGCCACC ACTGCGCCCA GCCCATCCTG
CGCCGCTTCG GACTCGAGGC CACGGTGCGG CCCTCGCTGG CGTTCTACAA CACCTGCGAG
GAAGTGGACC GCTTCATCGC GGTGGTGCGC CGGCTGAGCG GCGCGCGGCG CGTGCCGGCA
CGCTGA
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| Protein sequence | MSTSDALSGP VAAAQPALPP GLPDPATLAR LAGEFFAALP GDGGAHGGVP VPAQPTPPGL
SLPGVLTGGP ATPNVLPLGA AAPGANLVPS SPQHAAAHGA SAPALVPHAA APNGLPEHVA
TLPPTLDGRL GSHALGVPQV VPAASPLVGL PSHPSAGGAP AATDTPSPYY FLSHATSGPG
ASEARIAPLG SAPTGLPQEA DLRSLLRSDA PSSGSAPAAS PGAFYFLDAQ RHPGPHGSHA
GAVPNAAASA HPPFDVHAIR RDFPILQERV NGRPLVWFDN AATTHKPQSV IDRIAHFYAH
ENSNIHRAAH ELAARATDAY EGARETVRRF IGASSVEEIV FVRGTTEAIN LVAKSWGAQN
IGAGDEIVVS HLEHHANIVP WQQLAAEKGA KLRVIPVDDS GQVRLDEYRK LLNDRTKIVS
VTQVSNALGT VVPVKEIVEL AHRAGAKALV DGAQSVSHLR VNVQALDADF FVFSGHKIFG
PTGIGVVYGK REVLEDMPPW QGGGNMIADV TFEKTVYHGP PTRFEAGTGN IADAVGLGAA
LDYVERVGIE NIARYEHDLL DYATHALRPI AGVRLVGTAR DKASVLSFVL DGYTTDEVGK
ALNEEGIAVR TGHHCAQPIL RRFGLEATVR PSLAFYNTCE EVDRFIAVVR RLSGARRVPA
R
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