Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2772 |
Symbol | |
ID | 7270882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2899927 |
End bp | 2900568 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643571358 |
Product | GPR1/FUN34/yaaH family protein |
Protein accession | YP_002467751 |
Protein GI | 219853319 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.713345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.632048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAA CCATACTGGA TTATACCAAC GAAAACGATG TGATTGGGAT GAGTGAAACG ATAGGAACTC CAGAATACAC CGGGGTCAAG ATACATGACC CAACCTCGAC TGCGGGTCCG ATCGGGCTGC TCGCGTTCGG GATAGCGACG GTCCTGCTGA GCTTGGTGAA CGCCGGGTAT TACTCACTGG GATCGTCGAT CGTCATGATA GGCGCGTACG TGGGATTCGC CATGGCGATC ACCGGGTACA TGGAATGGAG GAAGGGGAAT ACGTTTGGTG CAGCAGCGTT CGTCACCTTC GGCTTCTTCT GGCTCACCTT CGTCGGCCTG CTAATCCTGC CTAAACTCGG TCTCGCCGAC GCAGCCAGTC CAACGGCGAT GGCCGCGTAC CTGTTCATGT GGGCGCTCTA CGCCTTCGTG ACGTTCATTG CCACCCTGAA GTACAACCGG GCGCTCCAGT TCATCTTTGC GACTGTGACC ATCCTCTTTG TCCTGCTGGG GCTGGGATAT CTGACAGGAA ATACGCTCTT CACGACGATC GGAGGTTACG AAGGGATCAT CTGCGGGCTC TCTGCGGTGT ATACCGGGTT CGGACAGGTG CTGAACGAAG TGTACGAGCG CGAGGTTGTC CCGTTAGGAT GA
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Protein sequence | MQLTILDYTN ENDVIGMSET IGTPEYTGVK IHDPTSTAGP IGLLAFGIAT VLLSLVNAGY YSLGSSIVMI GAYVGFAMAI TGYMEWRKGN TFGAAAFVTF GFFWLTFVGL LILPKLGLAD AASPTAMAAY LFMWALYAFV TFIATLKYNR ALQFIFATVT ILFVLLGLGY LTGNTLFTTI GGYEGIICGL SAVYTGFGQV LNEVYEREVV PLG
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