Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2728 |
Symbol | |
ID | 7270836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2856085 |
End bp | 2857164 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643571319 |
Product | NADH-ubiquinone oxidoreductase chain 49kDa |
Protein accession | YP_002467714 |
Protein GI | 219853282 |
COG category | [C] Energy production and conversion |
COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.316127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAAAA GAACAATCAT CCCATTCGGG CCGCAGCATC CGGTCCTCCC CGAGCCGATC CATCTAGACC TGGTGCTGGA GGACGAGCGC GTGATCGAGG CGATCCCCTC GATAGGGTAT GTCCACCGCG GTCTTGAGAA ACTGGTCGAG AAGCGGGAGT ACCCGGACAT GGTGTACATC GCAGAACGGA TCTGTGGGAT CTGCTCGTTC ATTCACAGCC TCACCTACTC ACAGGCGATC GAGCAGGTCA TGGGGGTTGA GGTTCCAGAT CGGGCTCGAT ACCTCCGGAC GATCTGGTCC GAGTACTCCC GTCTTCACTC GCACCTGCTC TGGCTCGGCC TCTTTGCAGA CGGGATGGGG TTTGAGTCCC TCTTCATGAA CGCCTGGAAG CTCCGCGAAC ATATCCTCGA CGACATGGAG GCGACAACCG GCGGACGTGT GATCCAGGGG GTCTGCAAAG TCGGCGGGGT CAGAAAGGAT GTCTCCAACC AGAAACTGAA GGAGATGGCA AAGGGACTCA ACGGGATCAA GCATGAACTG CGAGACCTGA CCAAGGTCTT CTCACATGAC GACTCGGTCG GTCACCGGCT CAGGAACGTG GGGGTCCTGC CACAGGATCA GGCCTACCTG CTCGGGGCCG TCGGGCCAGT CGGACGGGGA AGCGGATTGA ACATCGATAT GCGGATGCTC GGGTACGCGG CCTACGACGA ACTCTCGTTC AAGCCAGTGA CCGAGTCCAG TGGCGATTGC CTGGGCAGGT GTTTGGTCAG GGCCAACGAA CTCTTCACCT CGATCGATCT GATCGAGCAA GCTGTCGACA AGATTCCTGA CGGTCCGGTC GATGTGAAGG TGACCGGCAG CCCTGACGGG GAGTTCTTCT CACGGACCGA ACAGCCGCGT GGCGAGGTGG TCCACTATGT GAAGGGAAAT GGAAAGAAGA ACCTGGTCAG GTTCCGGGTC AGGACCCCGA GCTTCACGAA CATCCCGCCG CTGGTCGAGA TGCTCAAAGG GTGCGAACTG GCCGATGTGC CGATCATCGT CCTCTCGATC GACCCCTGCA TCGGCTGCGC AGAGCGGTAA
|
Protein sequence | MSKRTIIPFG PQHPVLPEPI HLDLVLEDER VIEAIPSIGY VHRGLEKLVE KREYPDMVYI AERICGICSF IHSLTYSQAI EQVMGVEVPD RARYLRTIWS EYSRLHSHLL WLGLFADGMG FESLFMNAWK LREHILDDME ATTGGRVIQG VCKVGGVRKD VSNQKLKEMA KGLNGIKHEL RDLTKVFSHD DSVGHRLRNV GVLPQDQAYL LGAVGPVGRG SGLNIDMRML GYAAYDELSF KPVTESSGDC LGRCLVRANE LFTSIDLIEQ AVDKIPDGPV DVKVTGSPDG EFFSRTEQPR GEVVHYVKGN GKKNLVRFRV RTPSFTNIPP LVEMLKGCEL ADVPIIVLSI DPCIGCAER
|
| |