Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2662 |
Symbol | |
ID | 7272484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2789095 |
End bp | 2789514 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643571253 |
Product | TonB box domain protein |
Protein accession | YP_002467649 |
Protein GI | 219853217 |
COG category | [R] General function prediction only |
COG ID | [COG3364] Zn-ribbon containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000144725 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.74286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACA AATGCACACA CTGTGAGAAG ATCTTTGAGG ATGGTTCCCC TGAGATCCTC AAGGGCTGCC CGGCCTGTGG TGGAAAGAAG TTCCTCTATG TCAGGGAGGA GGACCACCCT GTCGATCAGG TGGAGGGGAT GCCAGCCCCA GCGATCGAAG CAGACAAGAG CCCTGTAGGA ACGATCGAGG AACTGGGTGG CGATCAGGAG ACTGTCCAGG TGAGACCGGC CCATAAAGAG CGAGAGAAGG ATATATTCGA TCGGCTCGAG AGCATCAGCA TCAATGGACC CGGTTCGTAC GAGATCAATA TCGAGAAACT CGCTCAGAAC GGGGGACTTG TGCTCGGGCT GGGAAAAGAG GGGCAGTACG CGGTGGATAT CCTATCGATG GGCAAGTCCA AGAAAAAAGA TAAAAAATAA
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Protein sequence | MPHKCTHCEK IFEDGSPEIL KGCPACGGKK FLYVREEDHP VDQVEGMPAP AIEADKSPVG TIEELGGDQE TVQVRPAHKE REKDIFDRLE SISINGPGSY EINIEKLAQN GGLVLGLGKE GQYAVDILSM GKSKKKDKK
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