Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2552 |
Symbol | |
ID | 7270679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2681043 |
End bp | 2681840 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643571148 |
Product | hypothetical protein |
Protein accession | YP_002467547 |
Protein GI | 219853115 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00146174 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATA TTGATTATAT TAATAGAGAA ATTGATGAAC TAGAACGATT GGCCTGTAAA ACTGAAGAAG CAGCAAGAAA ACTGCTGTAT GAAACTCCAT TATCACATAT TACCCATCCA TATGGAGATT TTGGTGATCA ATCATATTAT ATCTGGCAAA GAGTTGACGA TGATCAAAAA GAAAATCAAC GAATTGCAAT TCGAGATTAT GAAAGATATT ACTCCGTGGG GCTGCATTTT ATCAAGGAAT TTCGTCCTGA AAAAGAGAGG GAATTCTCAG AATGCTATGA ATCTGGAGGA CGTACGCCGT TTCAACCGGG AATTATGGAT TATCTCAAAT TCCGTCACTC TCAAGAGGCA GAAAGTAAGG TAAAAATTAT TGATGAATTC GTTAATCGAT TTGAAATTCA AAGAAGTATC TTATATTCAG TACCTTATGT TGCAAAAATA AGTGAGCATA AATTACGAGA TATAATATCT GGGGATTATA TCGAAAGGGA AATTGAACAA TCCGAATATT TATACGAAAA AGGTTTTGAA AGAGCAGCCG GAGCATTAGC GGGCGTTGCA TTAGAGCAAT ATCTCAGAAC ACAATGTGAT AAAAATCAAA TCGATTACAA CAAGAAGGAA ACAATGGTTC CTTTGGTTCA AAAACTCTAT GATGAAAATA AAATCGATCT TATCTTGAAG AAAAAAATTG AACATCTGGC GAGTATTCGA AATTTCTGTG ATCATCCCTT TGAGGTCAAT AAAGGGCAAG TTAAGGAACT GATTGAAAAT GTGAAAAAGA TTGTTTGA
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Protein sequence | MSDIDYINRE IDELERLACK TEEAARKLLY ETPLSHITHP YGDFGDQSYY IWQRVDDDQK ENQRIAIRDY ERYYSVGLHF IKEFRPEKER EFSECYESGG RTPFQPGIMD YLKFRHSQEA ESKVKIIDEF VNRFEIQRSI LYSVPYVAKI SEHKLRDIIS GDYIEREIEQ SEYLYEKGFE RAAGALAGVA LEQYLRTQCD KNQIDYNKKE TMVPLVQKLY DENKIDLILK KKIEHLASIR NFCDHPFEVN KGQVKELIEN VKKIV
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