| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2535 |
|---|
| Symbol | |
|---|
| ID | 7271704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2665241 |
|---|
| End bp | 2665966 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643571130 |
|---|
| Product | tRNA methyltransferase complex GCD14 subunit |
|---|
| Protein accession | YP_002467531 |
|---|
| Protein GI | 219853099 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGG CCGGCGATCG TGTACTGCTG ATTGGGAACA GCAGAGCCTA TTACGTGACT
GCTGGCGAGG GGATGCTCAG CACGGACCTG GGTATGATCC CTCTCTCTGA CCTCATCGGC
AGGGAGGGCG GGGACCAGGT CGTCACCCAC CTCGGCACCG GGTTCTCTGT ACGGATTCCG
CGGCCGACAG ACTTCTTCGT CCATGCCAAG CGGAGCGGAG CCCCGATGCA CCCCAAGGAC
ATCGGGTCTG TGATCGCCTA TACCGGGATG AACAAGAAGG ATCATGTGCT AGATGCTGGG
ACCGGTTCCG GGGTGGCGGC GATCTTCTTC GGTTCGATCG CAGCGTCCGT GACCACCTAT
GAACAGCGGC CCGAGTTCGC GAAGCTGGCC GAGAAGAACC TCCAGGACGC GGCCCTGGAC
AATGTGACGG TTGTAGCCGC GGACATGCTG ACCGCGACCG GCACCTATGA TGTGATCAAC
CTCGACATGC AGATCACGCC GGAGCATATC CAGCACGCCG CGACGCTGCT GAAGCCCGGC
GGGTACCTGG CCTGTTATAC CCCGTTCCTG GAACATCTTT TTCTGGTATT GGATACGGCG
AAGAACCTCT TCTCCGAGGT TGTGACGCAC GAACTAATCG AACGGGAGAT GACCCGGACC
GACCGGGGCA CGCGACCGTC GACCCGGGTC TGTCATACCG GGTACATCAC CATAGCACGG
CGATAA
|
|---|
| Protein sequence | MIEAGDRVLL IGNSRAYYVT AGEGMLSTDL GMIPLSDLIG REGGDQVVTH LGTGFSVRIP
RPTDFFVHAK RSGAPMHPKD IGSVIAYTGM NKKDHVLDAG TGSGVAAIFF GSIAASVTTY
EQRPEFAKLA EKNLQDAALD NVTVVAADML TATGTYDVIN LDMQITPEHI QHAATLLKPG
GYLACYTPFL EHLFLVLDTA KNLFSEVVTH ELIEREMTRT DRGTRPSTRV CHTGYITIAR
R
|
|---|
| |