Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2472 |
Symbol | |
ID | 7271641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2611364 |
End bp | 2612182 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643571070 |
Product | nitroreductase |
Protein accession | YP_002467471 |
Protein GI | 219853039 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.151442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA TAACCATCGA TCCTGAATCC TGCACCAGGT GCGGGATCTG CTCCGAGATC TGCCCGATGG GGATCATCGA CCCGGCAGAC GAGAAGACCT TTCCCATGGT TCAGGATGCA AAATCCGGCC TGTGTGTTCA GTGCGGCCAC TGTGAGATAG GCTGCCCGTC GCAGGCTCTC CTGGTGAATA CCCCTCCAGG TGAAAAGATC CCCCTGCCCG TCGGTGCCGG TACCATCTCC CCCGAAGAGA TAGAGTTCTA CCTCAAAAAG CGCCGGTCCG TACGGCGCTT CACCAGCGAT CTCGTTCCAA AAGAGAAGAT CCTCGAAATC CTCGATATCG CCCGGTACGC CGCATCAGGA GGCAACGGGC AGCCGGTGCA GTGGATCGTC GTGCACGACC CAACGAAGGT GAAGAAGATC GCCGAGCTGA CCATCGAGTG GATGAAGATC CTCGTGAATT CCAGCCATCC GATGGCTGGC TACATTCCCC ATCTCATCGC AACGTGGGAG AACGGTTCGG ACCCGATCTG CCAGGGGGCC CCGCACCTGC TCTTCGCCCA TATTCCGGAT GGTAACCCGG TCGCATCCGT CGATGCCATC ATCGCCCTCA CCCATGTCGA TGTCGCTGCG CCGGCATTCG GGATCGGAAC CTGCTGGGCC GGCTTTGTTT CGATGGCGAC AGCTTCCTAC GAACCCCTCC AGCAGGAACT CGGCATCCCC GCTGGACGGA AGAGCGCCTA TGCAATGATG TTCGGCTACC CGCTGAACAG GGTCTACGGG ATCCCCCGCC GAAAACCCCT TGAGGTTTCA TGGCGCTAA
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Protein sequence | MNTITIDPES CTRCGICSEI CPMGIIDPAD EKTFPMVQDA KSGLCVQCGH CEIGCPSQAL LVNTPPGEKI PLPVGAGTIS PEEIEFYLKK RRSVRRFTSD LVPKEKILEI LDIARYAASG GNGQPVQWIV VHDPTKVKKI AELTIEWMKI LVNSSHPMAG YIPHLIATWE NGSDPICQGA PHLLFAHIPD GNPVASVDAI IALTHVDVAA PAFGIGTCWA GFVSMATASY EPLQQELGIP AGRKSAYAMM FGYPLNRVYG IPRRKPLEVS WR
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