Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2377 |
Symbol | |
ID | 7272098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2524063 |
End bp | 2524851 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643570978 |
Product | protein of unknown function DUF52 |
Protein accession | YP_002467381 |
Protein GI | 219852949 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0146872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.265283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA GAACATGCGC AGTGGCGGGT ATGTTTTATC CTGGGGAACC CAGCCATCTG GAACAACTGC TTGGAAAGTT CTTTGCAGTA ACCGGTCATG AGACCAGTGC CAGTGGGATA GTTGCCCCGC ATGCGGGGTA CATCTATTCC GGTGCGGTCG CGGCACTGGC TTATGCCACG CTCCCTTCTT CATTTGATGG AACTTTTGTG GTGATCGGAC CGAGTCATCG TGGTTATCCT ACCTGCACCT CAGCGGTTCC CTGGGAGACT CCACTCGGGA TTGTCGACAC CGATACTGAC CTGGTATCAG CGCTTGACCT TCCAGTGAAC GAGTCCTATC ATGCCGACGA GCACTCGCTT GAGGTGCAGA TGCCCTTCAT CAAATACCGA TTTCCACGGG CCAGGATCGC TCCAGTGCTG ATGGGAGATC AGGACCTTGC ATCCTCAGTC AGGCTCGGTC GGATGATCGC ACGGGCGGCT CGAGAGACCC GGCGGGAGAT ACGGGTGGTT GCTTCGAGCG ACTTTTCCCA CTATGTCCCT GAAACCGTGG CAAAGGGTCA GGACCTGTAC GCGATAGAGG CATTAAAGTC TCTGGAGATC GAACTCTTCT ACAACCGTCT ACGTGAACGT GGCTCTTCAG CCTGTGGATA TGGTACTATC GCAGCGATGA TCACGGCCTC TATTGAAGCA GGGGCTGAGA AGGGAGAACT TCTGAAGTAT GCAACGAGTG GGGATGTGAC CGGGGATCGT GCTTCCGTCG TTGGGTATGC AGCGATTGCG GTGATATGA
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Protein sequence | MKIRTCAVAG MFYPGEPSHL EQLLGKFFAV TGHETSASGI VAPHAGYIYS GAVAALAYAT LPSSFDGTFV VIGPSHRGYP TCTSAVPWET PLGIVDTDTD LVSALDLPVN ESYHADEHSL EVQMPFIKYR FPRARIAPVL MGDQDLASSV RLGRMIARAA RETRREIRVV ASSDFSHYVP ETVAKGQDLY AIEALKSLEI ELFYNRLRER GSSACGYGTI AAMITASIEA GAEKGELLKY ATSGDVTGDR ASVVGYAAIA VI
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