| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2215 |
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| Symbol | |
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| ID | 7270301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 2365042 |
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| End bp | 2366955 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643570828 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002467232 |
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| Protein GI | 219852800 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.245996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAC CAATCCGGGT ACTCTACGTC GATGATGAAC CAGATCTTCT CGAGATCGGC
AAACTGTTCC TTGAGATGGG GGGCTTTTTC GCTGTCGACA CGCTCTCTTC TGTCAGGGTG
GCGTTGGAAC AGTTGAACAC AGAACGATAT GATGCCATCA TCTCTGACTA TCAGATGCCC
GAAATGGATG GCATCCAGTT CCTTGTCGAG GTACGGAGTC GCTTTGGACA GATTCCATTC
ATCCTGTTCA CCGGGAGGGG CAGGGAAGAG GTAGTCATCC AGGCGATCAA CAGCGGAGCT
GACTTTTATA TCCAGAAAGG GGGAGAACCA CGTGCACAGT TTGCCGAACT CGCACATAAG
ATCAAACAGG CGACATCCCG GAAGAAGGCT GAGGATTCGC TCCGGAGGAG CGAGGATGAA
TATCGGTACC TTATTGAGCA CTCTGATGAG TCCATCGTTG TTATACAGGA CGAGATGCTG
CGGCTGATCA ACCAGCGAAC CGTCGAACGA ACCGGATATT CGAAAGAGGA ACTTCTGTCC
ATGCCATTTT CCATGCTCGT TCACCCTGAT GATCGAGCCA TGGTGGTGGA GCGATACCAG
AGGCGAATGC AGGGCGAGGT GCTTCCTTCA TGGTATACGT TACGGCTTAT GGGAAGAGAG
GGGGGAATCA TCTGGATTGA GGCCAGCGCG GTTATCATCG ACTGGGAGGG GCGTCCTGCC
ACGATCAATT TCCTGAATGA TATTACCGAG CGAAAACGGG CAGTGGAGGC ACTCAAGGAG
AGTGAAGAGA AGTATCGGGT GATCTTCAAC AATGAGATCT ACGCTATCTC TCTGTGTGAT
CTCGACACCC TGCAGTTGCT TGATGTAAAT GATGCTTATA TTCGAATGTA CGGTTATACT
CGAGAAGAAC TCCTCTCAGG TATGACCATT CGCGATATTA TTGCTGATCA AAAAGGATCC
TTCCCTGCGA CAGAGGAGGC TACCAATCGA GGAACCAGTT TCATTCCCCT GCGGTATCAC
AGGAAGAAGG ACGGCACCAT CTTTCCGGTG GAGATCGTCG GGGGTTCCCA TCTCTGGAAT
GGAAAGGAAG TGATCTTCTC TCTCATCCAT GACATCACCG ATCGTAAACG GGCGGAGGAG
GAACTTCGGC TCACCCAATC CCGGCTGGAT TCTGCCATGG AGGTTGGTAA GATCGCTTGG
TGGGAGATGG ACCGCGAGAC TGGAAAAGTG ATTTTTAACG AACGCAAGGC ACATATGCTT
GGATATCCGG TTGAACAGTT CTCCCATTTT TCAGATTTTA CCCGGCTGGT CCATCCTGAT
GATTTCGAAC AGATAATGCA GGCTATGCGT GATCATCTCA CCGGCATAAA AAACCAGTAC
GATGTCGATT ACCGAGTAAG CACGAAAGAT GGAAAGGAAC TTTGGTTCCA TGATATCGGC
GGAGTATCCG AGTATGCTTC CGATGGTAAA CCATTGAAGG TGACTGGACT TGTCATCGAC
ATCACCGACC GCAAACAGGC TGAAGAGGCG CTTCTCGGCG CAAAGAATTA CCTTGACCTT
ATTCTCAATT CCATTGCAGA TCCTGTTTTT GTCAAGGATG AAATGCATCG GAGGGTACTT
GGAAACGATG CCTACTGCAG GTTCATCGGG TTCACCCGTG ATGAGATGAT CGGTAAATCC
GATCATGAAC TCTATCCTCG TGACCTGGCG GACAAACTCA CCAGCGAGGA CGATCTGGTC
TTCGCATCCG GAACCGAGCG GGTTACTGAG GAGGAGATCA TCGACCATCG GGGCCAGGAT
CATACCATTG TCACCAAGAA AACCCTTCTC GTCGACGAGC AGGGGCGTAG ATTCGTCGTC
GGCATCGCCC GGGATATCAC CCGAGCGAAA ACGGGTAAAG GTGCTGCTCA ATGA
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| Protein sequence | MAAPIRVLYV DDEPDLLEIG KLFLEMGGFF AVDTLSSVRV ALEQLNTERY DAIISDYQMP
EMDGIQFLVE VRSRFGQIPF ILFTGRGREE VVIQAINSGA DFYIQKGGEP RAQFAELAHK
IKQATSRKKA EDSLRRSEDE YRYLIEHSDE SIVVIQDEML RLINQRTVER TGYSKEELLS
MPFSMLVHPD DRAMVVERYQ RRMQGEVLPS WYTLRLMGRE GGIIWIEASA VIIDWEGRPA
TINFLNDITE RKRAVEALKE SEEKYRVIFN NEIYAISLCD LDTLQLLDVN DAYIRMYGYT
REELLSGMTI RDIIADQKGS FPATEEATNR GTSFIPLRYH RKKDGTIFPV EIVGGSHLWN
GKEVIFSLIH DITDRKRAEE ELRLTQSRLD SAMEVGKIAW WEMDRETGKV IFNERKAHML
GYPVEQFSHF SDFTRLVHPD DFEQIMQAMR DHLTGIKNQY DVDYRVSTKD GKELWFHDIG
GVSEYASDGK PLKVTGLVID ITDRKQAEEA LLGAKNYLDL ILNSIADPVF VKDEMHRRVL
GNDAYCRFIG FTRDEMIGKS DHELYPRDLA DKLTSEDDLV FASGTERVTE EEIIDHRGQD
HTIVTKKTLL VDEQGRRFVV GIARDITRAK TGKGAAQ
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