| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2191 |
|---|
| Symbol | |
|---|
| ID | 7270276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2330830 |
|---|
| End bp | 2331927 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643570805 |
|---|
| Product | CDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_002467210 |
|---|
| Protein GI | 219852778 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00831743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCT CAGATAAACT GGCGGAAACA TACCGTGGAC GTACGGTTCT CATAACCGGT
CATACCGGAT TCAAAGGTGG CTGGCTTGCT TTGTGGCTTG AATCCCTGGG GGCACACGTG
ATCGGATACA GCCTCGACCC GCCAACAGAT CCTTCATTTT TTCAAGAGAC AGAATTATCC
CGCCGTATTA CTGATATTCG AGGTGATATC CTGGATCAAA CAAAACTGGA TCGGGTAATC
AATGAATACC GCCCGGATTT TGTGTTCCAT CTCGCTGCCC AGCCCCTAGT TCGTGCATCC
TATCAAAGTC CACGTGAAAC GTTCAATGTA AACGTCATGG GGACGGTTAA TGTTCTTGAA
TCCATCCGTG TCTCTCAACA TCCGACGGTC TGTGTCTGTA TCACCAGCGA CAAATGTTAT
GAGAACAAGG AATGGGATTA CGCCTACCGG GAGAACGATC CGATTGGCGG CCATGACCCC
TACAGCGCGA GCAAAGGTGC TGCCGAGATT GTAATCGCTT CGTACCGGAA GAGTTTCTTC
GAACCGGATG GATCACAGCC ACTGTGTGCT CTCTCGTCAG CACGAGCCGG AAATATCATC
GGTGGTGGGG ACTGGGCAGA TGATCGGATC GTCCCGGACT GTGTGCGATC GCTTGTGAAC
GGGGAGACGA TGCTGCTTCG TAACCCCACT GCAGTACGTC CCTGGCAATT CGTGCTGGAT
CCCCTGTTCG GCTATCTCCT CCTTGCGCAG AGAATGAAGG AGTATCCTGG GGAATATTCT
GGTGCATGGA ATTTTGGTCC ATATTATTCC AACAACGTGG ATGTCCAGAC GCTCACTGGA
AAGATCTTCC GGGAGTGGGG TATCGGGAGA TGGGAGAATA TGCCTCAACA GAATAATCTG
CATGAGGCGT GTTTCCTCAA ACTGGATATC GCCAAGTCGA TGACAAGATT GGGGTGGAAG
CCTGTTTATT CCATAGACGA TGCGATCCAT AAAACTATAG AGTGGTATAT GGCCGATTTC
TCTCGGGCTG AAGAGATGTA CAACTTTTCT CTTGACCAGA TTGCAATGTA CATGCACGAC
GCAGATAATG TGGAGTAG
|
|---|
| Protein sequence | MSISDKLAET YRGRTVLITG HTGFKGGWLA LWLESLGAHV IGYSLDPPTD PSFFQETELS
RRITDIRGDI LDQTKLDRVI NEYRPDFVFH LAAQPLVRAS YQSPRETFNV NVMGTVNVLE
SIRVSQHPTV CVCITSDKCY ENKEWDYAYR ENDPIGGHDP YSASKGAAEI VIASYRKSFF
EPDGSQPLCA LSSARAGNII GGGDWADDRI VPDCVRSLVN GETMLLRNPT AVRPWQFVLD
PLFGYLLLAQ RMKEYPGEYS GAWNFGPYYS NNVDVQTLTG KIFREWGIGR WENMPQQNNL
HEACFLKLDI AKSMTRLGWK PVYSIDDAIH KTIEWYMADF SRAEEMYNFS LDQIAMYMHD
ADNVE
|
|---|
| |