Gene Mpal_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2154 
Symbol 
ID7270237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2287705 
End bp2288556 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content55% 
IMG OID643570768 
Productprotein of unknown function DUF89 
Protein accessionYP_002467175 
Protein GI219852743 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC AGGAACGATG TATAAATTGT CTTCTCTCAA GGGTTAGGTT TGCCTGTAAT 
CAAGTTCCGG GGCAGGTCCC TGTCGATCAG GTGGAGGCTG CGTGCCTGGA TTTAATCAGA
GCACATCAGT TCGATCCCAT GCCGCAGACC CAGATTGCCA GTGCTATGCA TCGGTTGGTT
CGTGCCCTGA TTGCGAATGA CGATCCGTTC CTGGCTGTGA AGCAGCGGTC TACTGAGGAA
GCGCTGGCAG TCTGTAGAAG GGTGCACCCC ACGCTGAAAA CGCTGAAGGA TTTTGTCCTT
GCCTCGATCA TCGGGAACAC CTTTGATTAT GGGGTGCAGG AGCATCAGGT GACCAGCAGG
TTCCAGATCT TCTTCGATCA GGCATTTCAA GCAGGCCTCG GTGTCGACGA TATCGACCTG
ATGATTCCGC TCCTCGACCG GGTCGTCTAT ATCACTGACA ATTGTGGTGA GATCGTCTTT
GATCGGTTGT TGATCGATCA CCTCGTTGCC CAGGGCGTCC GGATAACCCT GGCTGTCAGG
GATGGTCCTG TTCTGAATGA TGCCACCCTG AATGACGCGC TGTTTCTCGG TCTTGATCGC
AGGGTGAATG TGCTGACCAC CACTGGGGGG GACGGCGAAC TCGGCGTGAA CCTCGACGTG
ATCCCGCCGG CTCTCTATGC TGCTATCCAT GACTGTACTC TGATCATCTC CAAGGGGATG
GCCAATTTCG AGTCTCTCTC GTTGTATCCG AATCTGCCAC CGGTCGCATA CCTGATGTCG
GTGAAGTGCG TGCCGGTCGG GGAGATGGTG GGGATGCCGG TTGGTTCGAT GGTCGCACTG
CTCAAACGCT GA
 
Protein sequence
MPVQERCINC LLSRVRFACN QVPGQVPVDQ VEAACLDLIR AHQFDPMPQT QIASAMHRLV 
RALIANDDPF LAVKQRSTEE ALAVCRRVHP TLKTLKDFVL ASIIGNTFDY GVQEHQVTSR
FQIFFDQAFQ AGLGVDDIDL MIPLLDRVVY ITDNCGEIVF DRLLIDHLVA QGVRITLAVR
DGPVLNDATL NDALFLGLDR RVNVLTTTGG DGELGVNLDV IPPALYAAIH DCTLIISKGM
ANFESLSLYP NLPPVAYLMS VKCVPVGEMV GMPVGSMVAL LKR