| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2120 |
|---|
| Symbol | |
|---|
| ID | 7271600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2251378 |
|---|
| End bp | 2252304 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643570734 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467141 |
|---|
| Protein GI | 219852709 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2899] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC TGAGTATTCT CGTCGTTATC GGTGGGCTGG TCCTCTTTGA GACCGTCAGC
AGTATCGATA ATGCAATCAT CAATGCAGAG GTGCTCTCTT CGATGGGGGA GAAGGCCCGA
CGCTGGTTCC TGGTCTGGGG TCTGCTCATC GCGGTCTTTG TGGTCAGGGG ACTGCTCCCC
TGGTTGATCG TCTGGATGGC AACTCCCTCG CTCGGGCCGA TTCAGGCCTT CACCGCGATG
TTCAGCAGCG ATCCGATGGT CCTCGAGGCG ATCGAACGAT CCTCTCCGAT CCTGTTGATC
GCCGGAGGGA CATTCCTGCT CTTCCTCTTC TTCAACTGGC TCTTCGTCGA GCATAAGCAC
TATGGGCTCC GGGGCGAGCG GTTCATCCAG AGCAAGGGGG TCTGGTTCTA TGCGGTTATC
TCCCTCCTCC TCACCGGGAT CGTCTGGTTC GCCCTGAAAA CAGATCCGAT GATGGCCTTT
GGTGCCGTCG TGGGGTCGAC TGCGTTCTTC ATCGTGAACG GGTTCAAACA GAATGCCGAG
GTGCAGGAGA AGCGGCTGAG TGGCGGTCAC CTGACCGATC TGAGCAAACT CTTCTACCTC
GAGGTGATCG ATGCCACCTT CTCGATCGAT GGGGTGGTCG GGGCCTTCGC CTTCACCCTC
CTGGTCCCGC TGATCATGAT CGGAAACGGG ATCGGAGCGC TGGTGGTGCG TGAACTGACG
ATTGGAAACA TCGATCGGAT CAGGCGGTAC CCGCTCCTAA AGAATGGTGC CATGTACTCG
ATCCTCTTCC TCGGGGGGAT CATGGTACTG GATGCGTTCG GCATCAAATC CCCATCCTGG
CTCTCTCCAC TGATCACATT CATCGTGGTC GGGTTCTTCC TGTACCGATC GATTCAGTGG
AATAGGGCTG CTGAGGTTAT CCCCTGA
|
|---|
| Protein sequence | MDILSILVVI GGLVLFETVS SIDNAIINAE VLSSMGEKAR RWFLVWGLLI AVFVVRGLLP
WLIVWMATPS LGPIQAFTAM FSSDPMVLEA IERSSPILLI AGGTFLLFLF FNWLFVEHKH
YGLRGERFIQ SKGVWFYAVI SLLLTGIVWF ALKTDPMMAF GAVVGSTAFF IVNGFKQNAE
VQEKRLSGGH LTDLSKLFYL EVIDATFSID GVVGAFAFTL LVPLIMIGNG IGALVVRELT
IGNIDRIRRY PLLKNGAMYS ILFLGGIMVL DAFGIKSPSW LSPLITFIVV GFFLYRSIQW
NRAAEVIP
|
|---|
| |