| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2089 |
|---|
| Symbol | |
|---|
| ID | 7271566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2215916 |
|---|
| End bp | 2217325 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643570700 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002467110 |
|---|
| Protein GI | 219852678 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCAC TCTATCTTGG AAAGATCCAG CTCCACTGGT GTGATTCCTG CCATGTTCCG
GTGCTCGGAG GACGGTGCAG GTGTGGCGCT GAGACGCGTT CCGTTCCGTT GACCCCCCCC
GGGGACATGC GCCCGGCGTT CGAATACGAT ATCGACCTGA TCAACCGGAT CTATACCGCT
CACTTCGGGA CACCCCTGAT CCCGGATGGG CACCTCGCCC TGCTGAACAA GGTCCCTGAC
AAGGACCGGA TGGAGGAGAT CGTGGTCGGG GGGGCCGTGG TCGGCCAGAT TCGGTACCTG
CCGGAGAAGG AGGAATGGGA ACCGATTCCC CGGCCGGCTG CCGCGGCGCT GCTTACGCCG
ACCGAACGGT TCGTGGTGAT CGATGACGGG GCGATCCCTT CGATCCGGGA TGAAGGAGCC
AGTGTACTGG CGCCGGGGCT CGCCTGGATC GCCGATTCGG TCGAGGCCGG CGATGAGGTC
TTCATCATGA CCAGGGACCA CCAGTGTGTC GGTGTCGGGC GTGCCCGGGT CGGTGCAGCC
GAGGCACGGA CCATGGAACG GGGAGCCATC GTGAGGACCA GAAGGAACAC CTCCGCTCCC
TGTATCCCCG GGGAGGCCAC CTGGGCGGAC GCGGTCAGGG CCAATCAGGC GATCATCGAC
AACTACGAGG CGATGGCGAT GGCCTTCGTC CGCGATGTCG CCGCGGCAAA CCCCATCCCG
GCGACGGTCT CGTTCTCTGG CGGAAAGGAC AGCCTGGTGA CGCTACTGAT CGTCCAGAAG
GCGCTTGGAA AGGTGCCGAT CCTCTTCTCC GATACCGGGC TGGAGTTCCC TGAGACCTAT
CAGAATCTCA AGGATGTGCA GGAGAAGTAT GACCTCGAGG TCGTCTCCTG TTCAGGTGAG
GCCGCGTTCT GGGAGACGCT CACCGAGCAG GGGCCGCCGG CCGTCGATGC ACGCTGGTGC
TGCAAGGTCT GCAAGCTGAC CCCGATCGGC GGGGCGATCC GGGAGCGCTG GGGGGAGTGC
CTCTCCTTCA TCGGACAGCG GAAGTATGAG TCGTTCAAGC GGATGAAGAG CGGGCGGGTC
TGGAGGAACC CGAATCTGCC GATCCAGCTC TCGGCGGCTC CGATCCAGCA CTGGACCGCC
CTGCATGTCT GGCTGTACCT CTTCGCCGAG GAAGCACCCT ACAATGCACT GTATCGGGCC
GGGTTCGACC GGGTCGGCTG TTATATGTGT CCGTCCAGCG ATCTCTCGGT GCTGCTCAGG
ATCGAGCAGG AGTATCCGGA CCTCTGGGAG CAGTGGAACC ATCGGATCGC AGCCTGGCAG
CAGGATAAGG GGTTGCCAGA GGACTGGTTC CGGTCGGGAT CGTGGCGGAA GAGGGCAGGT
GATTCTGGTG AAGAAGATAG TAGTTGTTGA
|
|---|
| Protein sequence | MPSLYLGKIQ LHWCDSCHVP VLGGRCRCGA ETRSVPLTPP GDMRPAFEYD IDLINRIYTA
HFGTPLIPDG HLALLNKVPD KDRMEEIVVG GAVVGQIRYL PEKEEWEPIP RPAAAALLTP
TERFVVIDDG AIPSIRDEGA SVLAPGLAWI ADSVEAGDEV FIMTRDHQCV GVGRARVGAA
EARTMERGAI VRTRRNTSAP CIPGEATWAD AVRANQAIID NYEAMAMAFV RDVAAANPIP
ATVSFSGGKD SLVTLLIVQK ALGKVPILFS DTGLEFPETY QNLKDVQEKY DLEVVSCSGE
AAFWETLTEQ GPPAVDARWC CKVCKLTPIG GAIRERWGEC LSFIGQRKYE SFKRMKSGRV
WRNPNLPIQL SAAPIQHWTA LHVWLYLFAE EAPYNALYRA GFDRVGCYMC PSSDLSVLLR
IEQEYPDLWE QWNHRIAAWQ QDKGLPEDWF RSGSWRKRAG DSGEEDSSC
|
|---|
| |