| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2084 |
|---|
| Symbol | |
|---|
| ID | 7271561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 2211112 |
|---|
| End bp | 2212299 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643570695 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002467105 |
|---|
| Protein GI | 219852673 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.942608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAAG AGACATCCAC AATTCTTGGC TTATCGTCAG CTCACCTGGT CACTGACATC
TATATGACCG TCATCCCGGC GGTCCTGCCG TACCTGATCG CTCATCACGA TCTCTCGTAT
TTTCTTGCAG GGCTGCTGGT CACCATCTAC AACCTCGCAT CCTCGATGAC CCAGCCGCTC
TTCGGCTGGC TGGCAGATAC CCGGGGGTTC ATGATCCCGC TGGTGCTGAG CGTCACCGGC
AGCGCCGTCT TCATCTCCCT GATGGGGTTC ACCGATTCGT TCCCCCTGCT GGCCCTCTGT
GCCGGAATCG CCGCACTCGG CCACGGCTCG TTCCACCCGA TCGGCCTCTC CTGCATCAGC
CGGTTCTGCA CCGACCAGAA TCGAGGTCGG ATGCTCTCGT ACTTTGTGGT CGGGGGGAAC
ATCGGGTTCG CCCTGGGTCC GGTGCTGGCC GGCATCGCCC TCGCCGTTGC AGGGCTCCAG
GGAATGGCCC TGCTCCTGCT GCCAGTCCTC GTGCTGGTAC CGGTTCTCCG TCGGATCCAC
CCGGACCTCT CCAGCCGGCT GAATCCTGAG AATGAAATCC ATACAGAAAG TCCCCATCCA
TCACACTGGC CGTTCCTGCT GCTGATGTTC GCCTCGACAT TTCGGGCCTG GGGGCTCTTC
GGCGTGGTCG CGTTCCTGCC GTCCTACATG GTCCAACTCG GCTACCCGGT GATGAGCGCG
GATCTGAGCA TCTCGTTCAT GCTGATCGGA GGGGTGATCG GACAGATCGC CGGTGGAAGA
CTCTCCGATC GCTACGGACG CAAAGAGTTC GTCCTCGCCG CCCTGGGCCT CTCGATCCCC
TGTTTCTACG GGTTCCTGCT CCTGCCAGGG ATCTACTCGC TCGCCTCGCT CCTTCTCTTC
GGGTTCTGGC TCTGGTCCAC CTTCTCGGTG ACCGTCGCGA TGTCCCATGA ACTCCTCCCG
AACAACATCG GCCTCGCCTC GGGTTCGATC ATGGGGGTCG TGGTCGGAGC CGGCGGCCTC
GGGGTCGCCC TGAACGGGAT GCTCGCTGAC CAGAGTTCGC TGTTGACCGC GATGATGGTG
CTGCCGGTGA CCATAGCGGT CAGCGTCATT CTCTTCCTGG TCACCCCGTA TCCGCTGAAG
ATCGGTCGGC TAGTTGCCGG CCATCTCCAT CGGCATCATT CAATCTAA
|
|---|
| Protein sequence | MKEETSTILG LSSAHLVTDI YMTVIPAVLP YLIAHHDLSY FLAGLLVTIY NLASSMTQPL
FGWLADTRGF MIPLVLSVTG SAVFISLMGF TDSFPLLALC AGIAALGHGS FHPIGLSCIS
RFCTDQNRGR MLSYFVVGGN IGFALGPVLA GIALAVAGLQ GMALLLLPVL VLVPVLRRIH
PDLSSRLNPE NEIHTESPHP SHWPFLLLMF ASTFRAWGLF GVVAFLPSYM VQLGYPVMSA
DLSISFMLIG GVIGQIAGGR LSDRYGRKEF VLAALGLSIP CFYGFLLLPG IYSLASLLLF
GFWLWSTFSV TVAMSHELLP NNIGLASGSI MGVVVGAGGL GVALNGMLAD QSSLLTAMMV
LPVTIAVSVI LFLVTPYPLK IGRLVAGHLH RHHSI
|
|---|
| |