Gene Mpal_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2077 
Symbol 
ID7271554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2203539 
End bp2204645 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID643570688 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002467098 
Protein GI219852666 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.917974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTC CGGTATATTT TGCACGTGTG CGGGCCAGGT CCCCTGGTGA GAACAAGATC 
AGCAGGGTGC GTGCCCTCTT CGAACGGGCA GGGTTTGCCG GGCATCTCAC ACCCAGCGAG
GCAACGGCCA TCAAGCTTCA CTTCGGTGAG GCCGGCGGTG ACGGGTATAT CAACCCGGTC
CTGGTCAGGC AGGTGGTGGA CAAGGTGAAG GAGTCGGGTT CCCGGCCGTT CCTGACCGAT
ACCAACACCC TGTACCTGGG GTCGCGGTCC GATGCGGTCG ACCACATCAC CACGGCCATC
GGCCATGGTT TCGACTACGC GGTGGTCAAC GCCCCGGTGA TCATCGCCGA CGGGCTCCGC
GGCGGCAATG TCACGTCGGT GCCGGTGCAG GGGAAGCACT TCTCCTCGGT GAAGATCGCC
GGCGACATCG CGGCGGCCCG ATCGATGATC GTGCTCTCCC ATTTCAAGGG GCACGAGGTG
GCCGGGTTTG GCGGGGCGAT CAAGAATCTC GGAATGGGGT GTGCATCCCC GGCCGGCAAG
CGGGAGCAGC ATTCGGCCCG GCCGATGGTC GTTCGCGATC TCTGTATCGG CTGCCAGACC
TGTCTGCCGG TCTGTCCGCA GCAGGCGATC GGGATGGACG AGGGTGCGGC GCTGATCAGT
AAAGACCGGT GTATCGGCTG CTTTGAATGC ATGACCGTCT GTCCGGAGCG TGCGATCGAT
GTGGACTGGG AGACCGATAT CCCGACGTTC ACCGAACGGA TGGTCGAGTA TGCTGCCGGG
GCGGCGAAGA CCAAGGAGGG GAGGATCGGA TATATGAACT TCCTGCTGAA CATCACGCCG
GACTGTGACT GCGTGCCCTG GTCGGACCGA CAGATCGTCC CTGACATCGG GATCCTGGCC
TCCAACGATC CGGTGGCGAT CGATGCAGCC AGCTTCGATC TGGTGAATCA GCAGATCGGG
TTCTCCGACA CCATGCTGAC CGATCACTTC GCCGCCGGCG AGGACAAGTT CACCGGCCTC
CGGTGTGTCA CCGACGGACG CCGGCAGGTC CAGTACGCCG AAGAGATCGG CCTCGGCATC
GGGGCATATG ATCTGATCGA GATCTGA
 
Protein sequence
MASPVYFARV RARSPGENKI SRVRALFERA GFAGHLTPSE ATAIKLHFGE AGGDGYINPV 
LVRQVVDKVK ESGSRPFLTD TNTLYLGSRS DAVDHITTAI GHGFDYAVVN APVIIADGLR
GGNVTSVPVQ GKHFSSVKIA GDIAAARSMI VLSHFKGHEV AGFGGAIKNL GMGCASPAGK
REQHSARPMV VRDLCIGCQT CLPVCPQQAI GMDEGAALIS KDRCIGCFEC MTVCPERAID
VDWETDIPTF TERMVEYAAG AAKTKEGRIG YMNFLLNITP DCDCVPWSDR QIVPDIGILA
SNDPVAIDAA SFDLVNQQIG FSDTMLTDHF AAGEDKFTGL RCVTDGRRQV QYAEEIGLGI
GAYDLIEI