Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2021 |
Symbol | cdc6 |
ID | 7272002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 2142972 |
End bp | 2144096 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643570635 |
Product | cell division control protein 6 |
Protein accession | YP_002467045 |
Protein GI | 219852613 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.377999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.256652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC GACCGTTGAT GTGGGACGAG ACGCTCTTCA AGGACCACGA GGTCTTTGAA GTCGACTTCG TCCCCGACGA GATCCACTTC CGCGAGGAGC AGATGCGCGA GCTCGTCTAC CAGCTCAGAC CCGGGATCTC CGGGTCCCGG CCGCTGAACA CGCTCGTCAA AGGTGTGCCG GGCACCGGAA AGACGACCAG TGTCAAGAAG GTCTTTTCTG AGATCGAGGA GAGCACCAGG AAACTGGTCC CGGTCTATGT GAACTGCCAG ATCGACAACA CCCAGTTCGG GATCTTCTCC CAGATCTACT ACCGGCTCTC CGGCCATCTC CCCCGTTCCA CCGGCCTCTC CTCGAAGCGG GTCTTCGACT CGATCGGAAA GATCCTGGAG CAGGACGGAA CGGTGCTGGT GGTCGCCCTC GACGATGCGA ACTACCTGCT CTATGAGAAC GAGATCAACA AGGTGCTCTA CACGCTCCTC CGGTCCCACG AGGTCTATCC GGATACCAGG ATCGGGGTGA TCACGATCAT CAGCGACCTC TCGGTGGACC TGATGAGCAG GATCGATCAG CGGGTCCAGT CGGTCTTCCG ACCGAACGAG ATCTACTTTC CCCCCTACAC CTGTGTCGAG GCCAAACAGA TCCTCTCAGA CCGGGCAGAA CAGGGGTTCT ATCCGAACGT GCTCCCTGAA GCAGTGCTGG ACCTCGTGGT CGACAGGACG ATGAATGCCG GCGACCTCCG GGTCGGGATC GACCTCTTAA AGCGGGCCGG ACTGCATGCA GAGACCGCGG CGCGGCGGGT GATCGAGGAG GGTGATGTCT GTAAGGCCTT CGAGGCCTCC ACGTCCCTGC ACCTGCTCGC CACGATCCGG ACGTTCAAAG AGGAGGAGAA GGTGCTCCTC CGGTTGCTCG CAGAGCAGTC ACAACAGGAG AGCGAGATCT CAGTCGGGGA GTTCTCCCGC TCGGTCGGGG ATAACCTCCC CTATGGCTAT ACCCGGATCT ATGAGATGAT CAGCAAGTTC GAAGCGATGC ATCTGGTCGA TATCAGATAT CGGGGAGGGC GTGGCCGTTC ACGCCTGCTG ACCCTCAGGT ACGACCCCCA GTTGGTGCTC GACACCCTGA AGTGA
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Protein sequence | MTVRPLMWDE TLFKDHEVFE VDFVPDEIHF REEQMRELVY QLRPGISGSR PLNTLVKGVP GTGKTTSVKK VFSEIEESTR KLVPVYVNCQ IDNTQFGIFS QIYYRLSGHL PRSTGLSSKR VFDSIGKILE QDGTVLVVAL DDANYLLYEN EINKVLYTLL RSHEVYPDTR IGVITIISDL SVDLMSRIDQ RVQSVFRPNE IYFPPYTCVE AKQILSDRAE QGFYPNVLPE AVLDLVVDRT MNAGDLRVGI DLLKRAGLHA ETAARRVIEE GDVCKAFEAS TSLHLLATIR TFKEEEKVLL RLLAEQSQQE SEISVGEFSR SVGDNLPYGY TRIYEMISKF EAMHLVDIRY RGGRGRSRLL TLRYDPQLVL DTLK
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