Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1981 |
Symbol | |
ID | 7270787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2109605 |
End bp | 2110273 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643570596 |
Product | Peptidylprolyl isomerase |
Protein accession | YP_002467007 |
Protein GI | 219852575 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.34689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACGAG CACATATTCT GCTCTGTGTC GGGCTGATCC TCGCAGCATC CCTCTTCATC GCCGGATGCA CGAGTACCCC CCAGAGCCAG CAACAGACCT CTTCGGTCTC TGGTCAGGCG ACCACCACCG TCGCCACTGC AGTCACCACT GCAGCCGCAG CGACCACCTC TGCAAAGAAT ACAACCAATG GAACGAGTTC TGCGGCCAAC CTGACCGGGA AGAAGGCCAT CCTGCACACC TCGATGGGTG ATATCACGAT CCAGCTGTAC GGGGATATGC CGGTCACGAC CGGGAACTTC GAAAAACTTG TCCAGAAAGG GTTCTACAAC AACCTGACCT TCCACCGGGT GATCGCCGGG TTCATGATCC AGGGCGGCGA CCCGAAGGGT GACGGCACCG GCGGTCCGGG GTATACGATC CCTGACGAGT TCACCGATCA CAACAAGAAC GATCGCGGGA CCATCGCGAT GGCCAACGCC GGTCCCAACA CCGGTGGCAG CCAGTTCTTC ATCAATCTGG TGAACAACAA CTACCTGGAT ACGAAGCACC CTGCGTTCGG CACGGTTGTC AGTGGGATGG ATGTCGTCGA CGCGATTGCG AAGGTCAAGA CCGACACGAA CGATCGCCCG GTGCAGCCGG TGACGATCAC CTCAGCTGAG ATCGTCTGA
|
Protein sequence | MRRAHILLCV GLILAASLFI AGCTSTPQSQ QQTSSVSGQA TTTVATAVTT AAAATTSAKN TTNGTSSAAN LTGKKAILHT SMGDITIQLY GDMPVTTGNF EKLVQKGFYN NLTFHRVIAG FMIQGGDPKG DGTGGPGYTI PDEFTDHNKN DRGTIAMANA GPNTGGSQFF INLVNNNYLD TKHPAFGTVV SGMDVVDAIA KVKTDTNDRP VQPVTITSAE IV
|
| |