Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1943 |
Symbol | |
ID | 7270747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2059290 |
End bp | 2060441 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643570557 |
Product | protein of unknown function DUF362 |
Protein accession | YP_002466970 |
Protein GI | 219852538 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [COG2006] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00286214 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.07931 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGT ATACTGTCTC TCTGACTCCC TGTCAGTCCT ATGACCTCGA TGAGGTCAGG GCTGCTCTCA CCACGGTCCT CGAACCCCTC GGTGGACTCG CTGCATTTGT TCACCCCGGA GATCGGGTGC TGATCAAACT GAACCTCCTC TCCTCGTACG ATCCCTCCGC TGCAGTCACC ACGAACCCGG CCCTGGTGCG GGCCGTGGTC GAGCAGGTGT ATCAGATCGG GGCTATACCG CTGGTCGGGG ACTCACCTGG CGGACGAAAC ACCCCGGCAT CGTATCGGGC CCTGCTCAAA CGGACCGGGA TTGCGCAGGT GATCGAGGAG ACCGGCTGCG AGTCCATCTT CTTCGATGAT CAGACCGTCG ACCGCTCCTC CGACCAGGCG AAGACGTTCC GTCGGTTCAC GGTGGCTGCG GTGGTGGATC AGGTGGATGT GGTGATCACC CTTCCGAAAC TGAAGACTCA CCAGCTGACG GGGATGACCG GGGCCGTGAA GGTGCTGTAC GGGTTCATCC CTGGGGTGAA GAAGGCGGCC TATCATCTCC ATACCGGCAA CAATATCGCG CAGTTCGCTG AGCTCCTCCT CGACCTCCAC CAGGTCGTCC CCCCGACGCT GGTGATCATG GATGCAGTGG TCGGGATGGA GGGGAACGGC CCCTCGCATG GCACCCCCCG TGCGATCGGG TTGTTGTTCG CAGGGACGAG CTCGCCGGCG ATCGACTTTG TGGCCGCGTC GGTGATCGGG TTCGATCCGC TCTGCCTTCC AACCGTCAAG GAGGCGGCAG ATCGGGGTGT TGGGCCCTCT TCGTTCGATC AGATCGCCAT CGCCGGCCCT GACCCGGCGC TCTTTACCAT TGCAGACTTC AAAATGCCCT CCTCAATGAG CCTGGCGAGG GTTCCACCGT TCGTCCTCTC CTGTGCACGC AGAGTCCTCG GAACCAGGCC GGTGGTCGAC CGGGCTCGGT GCACCCGGTG CGGCACCTGC CGCGACAACT GTCCGCCTGA GGCGATCACG ATGAAGGTCG GGGACTATCC GATGATCGAT CAGAGTCGAT GCATCGCCTG CTTCTGCTGT CAGGAACTCT GCCCTGCCGG GGCTATCGAG GTGAAGAAGC CGCTGCTTCG GCGACTCATC GAACGGGCCT GA
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Protein sequence | MASYTVSLTP CQSYDLDEVR AALTTVLEPL GGLAAFVHPG DRVLIKLNLL SSYDPSAAVT TNPALVRAVV EQVYQIGAIP LVGDSPGGRN TPASYRALLK RTGIAQVIEE TGCESIFFDD QTVDRSSDQA KTFRRFTVAA VVDQVDVVIT LPKLKTHQLT GMTGAVKVLY GFIPGVKKAA YHLHTGNNIA QFAELLLDLH QVVPPTLVIM DAVVGMEGNG PSHGTPRAIG LLFAGTSSPA IDFVAASVIG FDPLCLPTVK EAADRGVGPS SFDQIAIAGP DPALFTIADF KMPSSMSLAR VPPFVLSCAR RVLGTRPVVD RARCTRCGTC RDNCPPEAIT MKVGDYPMID QSRCIACFCC QELCPAGAIE VKKPLLRRLI ERA
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