Gene Mpal_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1893 
Symbol 
ID7272710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2009337 
End bp2009798 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID643570508 
Producthypothetical protein 
Protein accessionYP_002466921 
Protein GI219852489 
COG category[S] Function unknown 
COG ID[COG5513] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.479923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAA CGATCATTCT CCTGGCTCTG CTGGTTACCG GTATGCTATT GACTGCAGGG 
TGTACCGGGA CTGGTACCGC GAACAACAGC ACATCGACCT CGTCTTCAGC GACGCTGAAA
AATACGACGG TGGTGCCAGG GAACAGTTCC ATGCCGGTGA TAACCGGGAA TACCACGGCG
ATCACCCTGC CGGCAGGGAA GACCACCACG ATCGAACTGC CAGAGAACCC GACGACCGGC
TATGCCTGGA ACGTCACCCT GTCATCAGGA CTGCTGATCG AGAACAACAC CTACATCCAG
GATAACGGGA CCGCAAACAA GGTCGGTGCA GGTGGAACCC ACCAGTGGGT GGTCAGAGGG
GTATCAACTG GCAAACAGAC CTTCTCGGCA ATATACAAAC GCCCCTGGGA GGCGCTTACC
GGGAATGAGA CACAGTTCAC CGAATCCATC ACCGTGACCT GA
 
Protein sequence
MKRTIILLAL LVTGMLLTAG CTGTGTANNS TSTSSSATLK NTTVVPGNSS MPVITGNTTA 
ITLPAGKTTT IELPENPTTG YAWNVTLSSG LLIENNTYIQ DNGTANKVGA GGTHQWVVRG
VSTGKQTFSA IYKRPWEALT GNETQFTESI TVT