Gene Mpal_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1800 
Symbol 
ID7270346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1894024 
End bp1894863 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID643570415 
Productcobalt transport protein 
Protein accessionYP_002466829 
Protein GI219852397 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGG TGCATAATCG CCGTTCCTCA GGTCGGCGGC TGGAGGGGAA TGCGGCCTGG 
GCGAGGTTCA CCCCCGGGAC CTCGTTTCTT CACCGCCTGG ACCCCCGGAC CAAGATGGGG
GCGCTGGTCG TGATCAGTGG AGTCTCGCTG ATCCAGGACT CCCTCCTCCC CCTGCTGGCA
GCCCTGCTCT TCGTCCTGAT GCTGGCCGGG ATCTCCGGTC TGCTCCAGCC CCTGGGTCGG
GCCTTCTGGA CGTTCTCCCC CCTGCTCCTC TTCATCGTCT TCATCGACAT GCTCTTTCCG
AAGGAGTCGA CGGGCACGGT CTTTTACTCA GTGGACCTGG GCATGCTCCA TCCTACCCTG
AGTACCGGGG GGTTCCTCTT CGCCGCGGCG ATGGGTGTCC GGCTGCTCAC GATCGCCGGG
TTCGGCGTCC TCTTCATCAT GACGACCTCC TGCACGTCGG TCATCCACGC TCTGAAGGCC
CTGGGTGTCC CGGACACCTT CACCTTCTCT CTCGGGTATG CGCTCCGCTC CACCACGGCT
CTGAGCGCCG ATCTCGGGCA TATCATGGAT GCCCAGCGCT CGCGGGGGCT CGACTTCGAG
CAGGGGTCCT GGGTCCGGAA AGCAGAGATG CTGATGGCTC TGGTGATCCC GATGATCATC
GCGGTGCTGA ACCGGGCCCG GCTGGTGGCC GATGCCCTGC AGGCCAGGGG ATTTGGATCG
GGAACGAGAA CGACCTGTTA CCACCCCCCC CATCCCGGGC AGCGGGACCT GATCATGGGC
GCCCTGCTGG CCGGGCTGGT GGGGTTGACC GTCGTCTATC CCCGGCTCGT TCCCGGATAG
 
Protein sequence
MGLVHNRRSS GRRLEGNAAW ARFTPGTSFL HRLDPRTKMG ALVVISGVSL IQDSLLPLLA 
ALLFVLMLAG ISGLLQPLGR AFWTFSPLLL FIVFIDMLFP KESTGTVFYS VDLGMLHPTL
STGGFLFAAA MGVRLLTIAG FGVLFIMTTS CTSVIHALKA LGVPDTFTFS LGYALRSTTA
LSADLGHIMD AQRSRGLDFE QGSWVRKAEM LMALVIPMII AVLNRARLVA DALQARGFGS
GTRTTCYHPP HPGQRDLIMG ALLAGLVGLT VVYPRLVPG