| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1775 |
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| Symbol | |
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| ID | 7270321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1853477 |
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| End bp | 1856290 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570391 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002466805 |
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| Protein GI | 219852373 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.303689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCGC AAAGCGTGGA CAATTCATCT GGATCGTTGG GACCTGATCC AACTACGATG
GCGCTCCTCA CTCAGGGGCT TGACCGAATA CCCGTTCCGA TGCATGTGAT CGGTACAGAT
TACCGGATTC TTTATACGAA CGAGGCTGCA GCTACGCTTC TAGGAAAAAA GCGGGACGAT
ATCATCGGCA AGAAGTGCTC TGACCTCTAT CGCTCTCCAA ACTGCAACAC CCCTGAGTGT
CCGTGCAGGA TTGCGATGGA GAAGGGGATC AATTATAGTG TTGAGATCAC CATGGGGGAT
GTGGTCATCA ATGTGACCGG TGCACCCCTG ACTGACAGTT CTGGAAAGGT GATCGGTGCA
ATCGAGTACT TCCCTGAAGT GACCGGACAG AAGAAGGCAG TCGCCGATAT TGTCAACGTC
ACGAAGAAGG TGGAAAAAGG GGACTTTTCA GCACGAACGG ACCCGGCCTT TCATACCGGT
GACTTCAAGA AGATGGCCGA TGGGATCAAC AACCTCCTCG ACATCTTTGT GGCGAAGAAC
AACTGGTACA AGGCGATCAT CGACGCGGTG CCGTTCCCGA TCCATGTCAC TGATATGGAT
ATGAAGTGGA CGCTGATGAA TGCGGCCTTT GAGAAGACGT TGATCCAGCA GGGGACAATT
AAAAACCGCG ACTCCTCTAT GGGGCTGCCC TGCTCCACTG CCAATGCGAC GATATGCAAC
ACCGATGGGT GTGGGATCCG GCAGCTGCAC AAGGGGGTCA CCGAGAGTTA CTTCGTCTGG
GGCGATATGA ATGGCAAACA GACCACCTCG TCCCTTCGCG ACCAGGATGG TAACCAGATT
GGATATGTTG AAGTCGTGGA GGATCTCACT TCGGTCATTG CGGTCCGTGA CTTCATCAAG
GCCGAGGTGG ACCGGATGGC CACCAATCTC ACTCTGCTTG CAGAAGGAAA CCTCAACTTC
AATCTGGCCG TCAAGCCGGC TGATAAATTC ACCCAGGCAG AGCATGATGA TTTTGTGAAG
ATGAATGAGA ACCTGCGGGA GGCGCAGCTG GCGATCAATG GCCTCATCAA CGATGCGGGG
ATGCTTGCTG AAGCGGCCGT TGAAGGCAAA CTCTCGATAA GGGCGGACGC AACAAAACAT
AAGGGCGACT ACGGGAAGAT CATCGAGGGA TTCAATCAGA CCCTCGATGC GGTCATCGGA
CCATTGAATA TCGCTGCCGA TTTTGTTGCC AAGATCAGCG CAGGGATCGC ACCTGAAAAG
ATCACAGCGG ATTATCAGGG TGACTTCAAT GTTCTGATGC ATAACCTGAA TCAGCAGATC
GATGTGATTG TGATGCGGAA TACTGAACTC GATATGCTGA CAGAGGCTGC AATTGGGGGT
AAACTCACAA CACGCGCCGA TCCTTCCAAG TTCCAGGGCG GTAACAAAAA GATGATGGAG
GGTGTCAATG CGATGCTTGA TGCCATCATC GCTCCATTGA ATGTAGCCAT AGATTATTAT
AATAAAATCG GTAATGGTGA CATTCCTGCG AAGAGAACCA ACAAGGTGAA CGGCGACATC
GTCGCGATGC AGAGGAGCAT CAACAACTGT ATCGACAACC TCAATGCACT CGTCGCGGAT
GCGGGGATGC TCTCGGTGGC AGCAGTTGAA GGGAAGCTCG CGACCCGGGC GGACGCAACC
AGACACCAGG GCGACTTCCG GAAGATCATC GAGGGGGTCA ACAAGACACT CGATGCCGTG
ATTGCGCCGG TCAACGAAGC GCTGCGGGTC GCGCACGAGT TCTCCCAGTA TAACTTCACA
GCCCGGTTTG ATCGGAGTCT GGGGGTTGCA GGAGACTTTG TCAGGTTTGA GGATTCTCTG
GATAGTATCG GTATCGCGGT GACGAACGCC GTCGGTGCGA TCAATATCCA GGTGACCGAC
CTTGCCGCTT CGGCTGAGGA GGCAGCGGCC AGCGTTGAGG AGGTGGTCTC TGGGGCACAG
CAGGTCGCCG ACAACGCCGG CCAGGTCAGT TCCAACGCTG AGAAGGGGAA CCAGGGCCTC
GAGCAGGTGC TCAAGGCGAT GGAGGATCTC TCTGCAGCCG TCGAGGAGGT GACCGCCAGT
ACCGAGTCCG TGGCCACCCT CGCCAACGGT GCGAACACGC TCTCCAAGGA CGGAGCAGAA
CTCGCACGGA AGGCCGAGCA GGGGATGGTC GGGATCACCC GGTCCACCAC AGAAGTGGAC
CAGATCATCG TCGAAATCAA GGCTGAGATG GACAAGATTG GAAAGATCGT CGGTCTGATC
TCGGACTTGG CCAGCCAGAC CAACCTGCTC GCTCTGAACG CGGCCATCGA GGCGGCCCGG
GCCGGCGATG CCGGCCGTGG GTTTGCCGTG GTTGCAGCCG AGGTGAAGTC CCTGGCTCAG
GAGTCGAGGA CCTCTGCAGA GTCGATCGCA GAGATGATCG GGGGGCTCAA GACCAAGTCT
GAAAAGGCGG CTTTGGCCAC GGCATCCGCA TCAAAGGAGG TCCGCGAGGG ATCTGCAGTG
CTCTCTGAGA CCCTGAACGT CTTCAATAGA ATCGTGGCAG ACGTCGAGAA GATCACCCGC
TCGGTCGAAG AGGTCGCGAG CGCCTCTGAA GAGCAGGCAG CCACCGTCGA GGAGATTACG
GCCAGTGTTC ACGAAGTCGG CAGTCTGGTT GAAGGCACTG CCAGTGAAGC CGGCGATGCA
GCCGCAGCGA GTGAAGAGAC CTCGGCTGCG ATCGACGAGG TCCGGAAGAT CGTCGAGAAT
GTGAATATGA TCGCTGATAC CGTCGCCAGA GAGATGAGCA AGTTCACGGT ATGA
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| Protein sequence | MSPQSVDNSS GSLGPDPTTM ALLTQGLDRI PVPMHVIGTD YRILYTNEAA ATLLGKKRDD
IIGKKCSDLY RSPNCNTPEC PCRIAMEKGI NYSVEITMGD VVINVTGAPL TDSSGKVIGA
IEYFPEVTGQ KKAVADIVNV TKKVEKGDFS ARTDPAFHTG DFKKMADGIN NLLDIFVAKN
NWYKAIIDAV PFPIHVTDMD MKWTLMNAAF EKTLIQQGTI KNRDSSMGLP CSTANATICN
TDGCGIRQLH KGVTESYFVW GDMNGKQTTS SLRDQDGNQI GYVEVVEDLT SVIAVRDFIK
AEVDRMATNL TLLAEGNLNF NLAVKPADKF TQAEHDDFVK MNENLREAQL AINGLINDAG
MLAEAAVEGK LSIRADATKH KGDYGKIIEG FNQTLDAVIG PLNIAADFVA KISAGIAPEK
ITADYQGDFN VLMHNLNQQI DVIVMRNTEL DMLTEAAIGG KLTTRADPSK FQGGNKKMME
GVNAMLDAII APLNVAIDYY NKIGNGDIPA KRTNKVNGDI VAMQRSINNC IDNLNALVAD
AGMLSVAAVE GKLATRADAT RHQGDFRKII EGVNKTLDAV IAPVNEALRV AHEFSQYNFT
ARFDRSLGVA GDFVRFEDSL DSIGIAVTNA VGAINIQVTD LAASAEEAAA SVEEVVSGAQ
QVADNAGQVS SNAEKGNQGL EQVLKAMEDL SAAVEEVTAS TESVATLANG ANTLSKDGAE
LARKAEQGMV GITRSTTEVD QIIVEIKAEM DKIGKIVGLI SDLASQTNLL ALNAAIEAAR
AGDAGRGFAV VAAEVKSLAQ ESRTSAESIA EMIGGLKTKS EKAALATASA SKEVREGSAV
LSETLNVFNR IVADVEKITR SVEEVASASE EQAATVEEIT ASVHEVGSLV EGTASEAGDA
AAASEETSAA IDEVRKIVEN VNMIADTVAR EMSKFTV
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