| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1769 |
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| Symbol | |
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| ID | 7270315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1843273 |
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| End bp | 1847304 |
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| Gene Length | 4032 bp |
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| Protein Length | 1343 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643570385 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002466799 |
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| Protein GI | 219852367 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.221131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA CTCGTAAAGA GGTCGTGACA GAGAACAACT CTGGTCGCAT GGATGGACAG
AAGGTCAGCG CTGACCAGCG GTCGGTGGCA TCACATATGA ATATGGAGAG TAAGAACTCC
TTAGATCTCA ATCAAGCCGC CTCCCAGTGG TCGACCGTTT TTTCACTCAG TCCCCAACCG
ATTCTGATCA CCGATGGTGA GTTTTCGATT CTGAAGGGAA ATGAAGCGTT TGTTGATCTG
AGTGGAATAT CTCAGGAAAA ACTTGTCGGC AAGAAGATCC AGGACTTCAT GATCTCTTCA
CAGGAGGGGG AAGGTGCTCG TGAAGCCCTC ACCCAGCGAA GAAGAACGAC CGGGACCGTC
ACGATCACTT TCCCTGCAGG GGTGCAGACC CTGGAACAGT ACTGTATTCC TGTATGTGAA
GAGGGTAAAC AGATCAGTAC AGTGGTCTTC ATCTTCAAAA ATATCACCCG CAGAGTCCGG
GCGGAGGAAG AGACCGAGAA GATCAAGCAG AAACTGCTCC ATGACTATGG TGAACGGGTC
AAGGAGCAGA AGTTATTCTA TGCCACGGCT GCGCTGATCC AGGATGATTC ACTGACTCCT
GAGGAGGTGC TCTCAGAGGT GGTGAACCTG ATTCCACCCG GCTGGCAGTA TCCTGAAGTG
ACGGCGGCCA GGATCACGGT GGGTGATATC GATGTCAGGA CCCCCCACTT TCAAAAGACT
GCCTGGAAGC AGGAGGCCTC CTTTGCTATC AAAGATGGAA ACCGTGGAAC TCTTGAGGTG
GTCTATCTTG AGGATAAACC GTTCGAAGCC GAGGGACCGT TCCTCGCAGA GGAGCGGAAT
CTGATCAACT CGCTCTCGGA CATGCTCAAG ACCTACCTCG ACCGGAAGAG CGGTGAAGAG
CACCTGGCAG AGCGGATCAA AGAGCAGGAA GCACTGCTCC ATGATTACGG CGAGCGGGTC
AAGGAACAGA CCCTCTTCTA CTCGACAGCC ACGCTGATCC AGGATGATCT CCACACCACG
GCAGAGGTTC TCTCCGAGAT TGTTGAGTTG ATCCCGCCCG GCTGGCAGTA TCCCGAGGTG
ACAGCAGCGA GGATCACGGT GGGTGACGTC GATGTCAGGA CCAGGAACTA TCGGAAGACC
TCCTGGTCAC AGACTGCTCA GTTCAGTGTG AAGGGTGGAA AAGAGGGTGT CATCGAGGTT
GTATACCTCG AAGAGAAGCC GGCCGAGGTC GAAGGACCGT TCCTCGCAGA GGAGCGGAAT
CTGATCAACT CGCTCTCGGA CATGCTCAAG ACCTACCTCG ACCGGAAGAG CGGTGAAGAG
CACCTGGCAG AGCGGATCAA AGAGCAGGAA GCACTGCTCC ATGATTACGG CGAGCGGGTC
AAGGAACAGA CCCTCTTCTA CTCGACAGCC ACGCTGATCC AGGATGATCT CCACACCACG
GCAGAGGTTC TCTCCGAGAT TGTTGAGTTG ATCCCGCCCG GCTGGCAGTA TCCCGAGGTG
ACAGCAGCGA GGATCACGGT GGGTGACGTC GATGTCAGGA CCAGGAACTA TCGGAAGACC
TCCTGGTCAC AGACTGCTCA GTTCAGTGTG AAGGGTGGAA AAGAGGGTGT CATCGAGGTT
GTATACCTCG AAGAGAAGCC GGCCGAGGTC GAAGGACCGT TCCTCGCAGA GGAGCGGAAC
CTGATCAACT CGCTCTCGGA CATGCTCAAG ACCTATCTCG ACCGGAAGAG CGGTGATGAG
CACCTGGCAG AGCGGATCAA AGAGCAGGAA GCACTGCTCC ATAATTATGG CGAGCGGGTC
AAGGAACAGA CCCTCTTCTA CTCGACAGCC ACGCTGATCC AGGATGATCT CCACACCACG
GCAGAGGTTC TCTCCGAGAT TGTTGAGTTG ATCCCGCCCG GCTGGCAGTA CCCCGAGGTG
ACAGCAGCGA GGATCACGGT GGGTGACGTC GATGTCAGGA CCAGGAACTA TCGGAAGACT
TCCTGGTCAC AGACTGCTCA GTTCAGTGTG AAGGGTGGAA AAGAGGGTGT CATCGAGGTC
GTATACCTCG AAGAGAAGCC GGCCGAGGCT GAGGGACCGT TCCTCGCAGA GGAGCGGAAC
CTGATCAACT CGCTCTCGGA CATGCTCAAG ACCTACCTCG ACCGGAAGAG CGGTGAAGAG
GAACTTGTAC GGCATATGAC AGAGATCCGG GAGCTCCAGC ACCAGACCGA TACGATAGTG
CAGGAGAATC CGATGCCGAT CATTCTTCTG GATCAGAAGT TCCATATCAT GGTCACCAAC
GATGCCTATG TGAAACTGAC CGGCATTGAG AAGGAGCGGT TGCTCACCAT GTCTGCCACT
GATCTCGACG TCATTGAGCA TAGCGGCGAA GGGTTGCGTG AGTTGCTCCA AAAGAAACAG
CGGACCTACG GCGAGCTGAT CGTCAACTTC CCTGCAGGGA GAAAGACCCT TGAACAGCAT
GGCATTCCGG TCTTCACCAC AGCCGGTGAA CTTTCGAGGC TCCTGATCGT GTACAATGAT
GTGACCGAGG AACGGCAGAA GATGCATCAG ATCAGCCAGT TGAAGCATCG GTCTGAGACG
ATAGTGCAGG AGAACCCGAT GCCGATCCTG CTGACTGATG CCGAATTCAA TATCGTGGTC
ACCAACCACG CCTATGTGGA ACTGACCAGT ATCGATCGGG ATCGTCTGCA GCGGATGAAT
GCACGTGATT TCAAGATCCT TGAGCAGAAG GGGGAGGGGC TCCGTCGGGT GGTCAGGGAA
CATCTGCCGG CTACCGGTGA GGTGACCGTT GAGTTTCCAA TAGGCGCTCG TACTCTTGAA
CAGTACGGAA TCCCCATCCT TGCCGATGAT GGTTCCCTGG TCAACATCCT GATCGTGTAC
AATGATGTGA CCACGCAGCG TGCGCAGGAG CAGGAGATCC AGGTGATGAT GAAGGAGTCG
CAGCAGAAGG CTGATCAACT CTCGAGGAGT TGTGTCGATC TCGACGAGTG CATGTCCCTG
ATCGCGGCGA AAAATCTGAC ACATGTCGTG TCCATCGAGG ACGGTGACCC GTTGACCGGG
GTCAAGCGAG ATTATAATGA CGCCATAGCG GCTATCCGGG ATGTTATTGC TAGTATCAGA
GGATCGATGG TCCAGTTGAA CCTCACCATC GAGGATTCCA GCAGGTCCAC TGAAGAGGTG
GCCAGGGCTG TCGAACAAGT CGCGATCGCA ACCCAGAAAA GTTCTGAGGC TGCAAAGGTG
CAGCTCGATC GAATCGAAGG GGTAAGCAGA GAGATTGGGG ATCTCTCGGC GTCGATCGAG
GAGATCGCCA GTACCTCCCA GACGGTCCGG GACCTGGCAG CCAGAGTTGC CCAGGAAGGG
AACCAGGCGG CCGGGCTTGG AAAGGATGCC ACGCAGAAGA TGAAGGTGGT GGAGGAGATC
TCTGAGCAGA GTGTGCATGA GATCAATCAG CTCAATGAAC AGATGCACCA GATCACCAAG
ATCGTGAACC TGATCACTGA GATTGCCAAC CAAACCAACC TGCTGGCCCT GAATGCAGCC
ATTGAAGCGG CCCGTGCTGG TGAACACGGT CGCGGATTTG CGGTCGTTGC CGGCGAGGTC
AAGAACCTTG CCAGTGAATC GAGGAAGGCG AGTCAGCAGA TCGAGGATCT GATCGTGTCG
ATCCAGAAGA ACTCTGACAA GACTGCCTCC TCAATGCAGA CCTCATACAA TGAGATCAAG
GTGGGCATCG AGAGTGTCGG AAAGACGATC GATTCCTTGA ACCGGATCAC CGTCGAAGCT
GACAAACTGG TTGAGGGGAT CAGTGAGATC TCACGGGCGA CAGGAGACCA GGCAGAGGCG
ACCAACCGGG TGATGGAAGG GATCGAGGAA TCTGCCGGCA ATGTCAAGGA AAACCTGGGA
ATGATGGAGG ATCTGGCTGC CCTCGCTGAA GAGACGAGTG CATCCTCTGA GGAGATCTCA
AGTGCTGCAG GGGAGCTCAC CACGATGTCT GACCATGTGA AGGGGCTGAT CGTTCAGTTC
CAGCTGGAGT GA
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| Protein sequence | MEMTRKEVVT ENNSGRMDGQ KVSADQRSVA SHMNMESKNS LDLNQAASQW STVFSLSPQP
ILITDGEFSI LKGNEAFVDL SGISQEKLVG KKIQDFMISS QEGEGAREAL TQRRRTTGTV
TITFPAGVQT LEQYCIPVCE EGKQISTVVF IFKNITRRVR AEEETEKIKQ KLLHDYGERV
KEQKLFYATA ALIQDDSLTP EEVLSEVVNL IPPGWQYPEV TAARITVGDI DVRTPHFQKT
AWKQEASFAI KDGNRGTLEV VYLEDKPFEA EGPFLAEERN LINSLSDMLK TYLDRKSGEE
HLAERIKEQE ALLHDYGERV KEQTLFYSTA TLIQDDLHTT AEVLSEIVEL IPPGWQYPEV
TAARITVGDV DVRTRNYRKT SWSQTAQFSV KGGKEGVIEV VYLEEKPAEV EGPFLAEERN
LINSLSDMLK TYLDRKSGEE HLAERIKEQE ALLHDYGERV KEQTLFYSTA TLIQDDLHTT
AEVLSEIVEL IPPGWQYPEV TAARITVGDV DVRTRNYRKT SWSQTAQFSV KGGKEGVIEV
VYLEEKPAEV EGPFLAEERN LINSLSDMLK TYLDRKSGDE HLAERIKEQE ALLHNYGERV
KEQTLFYSTA TLIQDDLHTT AEVLSEIVEL IPPGWQYPEV TAARITVGDV DVRTRNYRKT
SWSQTAQFSV KGGKEGVIEV VYLEEKPAEA EGPFLAEERN LINSLSDMLK TYLDRKSGEE
ELVRHMTEIR ELQHQTDTIV QENPMPIILL DQKFHIMVTN DAYVKLTGIE KERLLTMSAT
DLDVIEHSGE GLRELLQKKQ RTYGELIVNF PAGRKTLEQH GIPVFTTAGE LSRLLIVYND
VTEERQKMHQ ISQLKHRSET IVQENPMPIL LTDAEFNIVV TNHAYVELTS IDRDRLQRMN
ARDFKILEQK GEGLRRVVRE HLPATGEVTV EFPIGARTLE QYGIPILADD GSLVNILIVY
NDVTTQRAQE QEIQVMMKES QQKADQLSRS CVDLDECMSL IAAKNLTHVV SIEDGDPLTG
VKRDYNDAIA AIRDVIASIR GSMVQLNLTI EDSSRSTEEV ARAVEQVAIA TQKSSEAAKV
QLDRIEGVSR EIGDLSASIE EIASTSQTVR DLAARVAQEG NQAAGLGKDA TQKMKVVEEI
SEQSVHEINQ LNEQMHQITK IVNLITEIAN QTNLLALNAA IEAARAGEHG RGFAVVAGEV
KNLASESRKA SQQIEDLIVS IQKNSDKTAS SMQTSYNEIK VGIESVGKTI DSLNRITVEA
DKLVEGISEI SRATGDQAEA TNRVMEGIEE SAGNVKENLG MMEDLAALAE ETSASSEEIS
SAAGELTTMS DHVKGLIVQF QLE
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