Gene Mpal_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1680 
Symbol 
ID7271243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1738390 
End bp1738956 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content46% 
IMG OID643570297 
ProductRubrerythrin 
Protein accessionYP_002466713 
Protein GI219852281 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTT CACAGACAGA AAAAAATTTA CTTGCAGCAT TTGCAGGTGA ATCCCAGGCT 
AGAATGAGAT ATACCTTTTT TTCGAGCATC GCAGCCAAAG AAGGTTACGA ACAGATCGCA
GCAATATTCC TCGAAACTGC GGAGAACGAA AAAGAACATG CAAAGATATT CTTCAAGCTG
CTTGAAGGAG GAACTGCGGA GATCACCGCC GGATATCCAG CAGGCGTGCT CAGGTCGACA
GCGGAAAATC TCTTGGCAGC AGCGGATGGT GAGAAGATGG AATGGACTAC CCTCTATCCC
AACTTTGGTG ATGTTGCAGA GCAGGAGGGC TTCATTGAAG CTGCAGCAAC CTTCAGAAAA
ATCGCAACAG TGGAGTCGTC CCATGAGCGG CGTTACAGAA AACTGTTTAC AAATATTGAA
CAACATGCCG TCTTTAAAAA AGATGTCCCA ACCAGTTGGA AATGCAGGAA TTGTGGTTAT
GTTCTGAATG CAGGAGATGC TCCCGAAAAA TGCCCAGTCT GTGATCACCC CCAGAAATAT
TTTGAGGTCT GGTGCGAGAA CTACTGA
 
Protein sequence
MKGSQTEKNL LAAFAGESQA RMRYTFFSSI AAKEGYEQIA AIFLETAENE KEHAKIFFKL 
LEGGTAEITA GYPAGVLRST AENLLAAADG EKMEWTTLYP NFGDVAEQEG FIEAAATFRK
IATVESSHER RYRKLFTNIE QHAVFKKDVP TSWKCRNCGY VLNAGDAPEK CPVCDHPQKY
FEVWCENY