Gene Mpal_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1350 
Symbol 
ID7269955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1394398 
End bp1395729 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content61% 
IMG OID643569984 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_002466406 
Protein GI219851974 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.470357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAA TCCCAGAGAA GCCCCCGGAC GAGAAGGAAC TGCTCGCAAC CCATTACAAG 
GAGTTCATGG ACCTGCTCCA GCAGTACCAT AATACCGGCC CGGAAGCCGG ATCGATTGTG
GTGCTGGTGC GGAAGTACAA CGAACTGGAA TACATCCACT GGGACGACCT GCGGCGGAAG
AATCTGCCGG TCGACCCGGC CATCTTCTGG CTGCTCTTAA AATTCCTCAG GTCAAGCCAG
TTCAGGACGA TCCGGATCGG CCCCGAATCC TTCGGCTTCG CCGTGCTCGA GCGATTCCAA
CAGGCACTGC ACCTGGTGGA CAAATCGTCG CCGGCGACCT TCGACGGGTT CATGGGGATG
CCGCCGAGCG AGACGGCGAA GCAGCAGTAC CTGATCGACT CGCTGATGGA GGAGGCGATC
GCGTCGAGCA GGCTCGAGGG TGCAGCGACG ACACGCGACG TGGCCAAGAA GTTCCTGCGC
GAAGGGAAAC AGCCGCGGAC GAACGGAGAA CGGATGATTT GGAACAACTA CCTGACGATC
ACCTGGCTCC AGGAGATCCG CGACAAGCCC CTGACCCCTG CGTTGATCCG GGAGATTCAC
GAGGAGATCA CGCGGGGGAC GCTCGAAGAG ACGGCGGACG AGACAGAGTT CCGCGAATCG
AACGAGATCC TGGTCAAGGA CAGGGCCGAC CAGACGGTGG TCTATCATGA TCCGCCCGAT
TTCAATCAGA TCCCCCCGAT GATCGACGAC CTCTGCCGGT TCGCGAATGA TGAGGAGACG
TTCGTGCACC CGATCGTCAA GGCGATCGTG ATCCACTTCC TGATCGGGTA CATCCATCCG
TTCAACGACG GGAACGGGCG GATGGCCCGG GCGCTCTTCT ACTGGTTCGT CCTCAAGCAC
CGGTACGACC TCTTCGAATA CCTCTCGATC TCGCGCCTCT TCCTCGATGC GCCGGCACAG
TATACACGGG CCTACCTGTT CGCAGAGACC GACGGCAACG ACATGACCTA CTTCATCGAC
TTCAACCTCA GGACGATCGG CCGGGCGCTC GACTCCCTCC GGAAGTACAT CGCGACGAAA
CGACAGGAGG AAGAGGCGTC GCTCCGGCTC GTCGAGGAAT TGCCGGGGCT CTCGTTCCGG
CAGGCAGCGA TCCTGAAGGA GTTCATCACC CACCCGTTCC AGCCGTTCAC CGTCGCCGAG
ATCGCCGGCA CCTATCATGT GGCGCTCCAG ACGGCACGAC ACGACCTGCA GACACTCGAG
CGGCTCGGGA GGGTGCGGTC GATGCGGGAT GGAAAACGGC AGGTCTTCCT GTACCAGCAA
AGAGACCAGT AA
 
Protein sequence
MTRIPEKPPD EKELLATHYK EFMDLLQQYH NTGPEAGSIV VLVRKYNELE YIHWDDLRRK 
NLPVDPAIFW LLLKFLRSSQ FRTIRIGPES FGFAVLERFQ QALHLVDKSS PATFDGFMGM
PPSETAKQQY LIDSLMEEAI ASSRLEGAAT TRDVAKKFLR EGKQPRTNGE RMIWNNYLTI
TWLQEIRDKP LTPALIREIH EEITRGTLEE TADETEFRES NEILVKDRAD QTVVYHDPPD
FNQIPPMIDD LCRFANDEET FVHPIVKAIV IHFLIGYIHP FNDGNGRMAR ALFYWFVLKH
RYDLFEYLSI SRLFLDAPAQ YTRAYLFAET DGNDMTYFID FNLRTIGRAL DSLRKYIATK
RQEEEASLRL VEELPGLSFR QAAILKEFIT HPFQPFTVAE IAGTYHVALQ TARHDLQTLE
RLGRVRSMRD GKRQVFLYQQ RDQ