| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1307 |
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| Symbol | |
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| ID | 7271167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1341220 |
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| End bp | 1344897 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643569941 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002466364 |
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| Protein GI | 219851932 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.551936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA AACCATTTCG TAATACCCAG GAATATTTTC ATGCCTTTAT CAGGACTGCG
CAATACATCC CTAACCTGAC AACACGACAG GATATTCTGA GTGAAACCGG CAGTGTCTTA
GTCAACTTCT TCGGTGCAGA TCTTATTGGA TTCTTTGAAC CGGGAAAAGA CGGCGAGATT
GAAGGCCATC ACTGGGTTTT ACCGGAAGGT ATGCCGGGTA CTGCACTCCT GACCAGGGAA
ACAGAAATGA TCGTTACTGG AGTCCTGGAA ACAGGATTTC TTGCTGCACA ACAGATAGAT
ATAACGGAAC CATATGCAAC TGTTTTTTTA CCGATCCTAT GGGAGAATCA GACTGCAGCA
GTCATGCTGA TAGGCCACCG GACATCCGAT CCCATTCCAA AAGAATTGCT CAATATCTAT
CTTGCAGTTG CAGGCCTCGT GACCAATGCA CTTGCCGGTG CCTACAAGGG ATTTAAAAAT
ATCAAAGCGA GAAAACGTGC GGAGGAGAGT CTGGAGTATG AGAGAAAGCA ACTGCTTTCG
CTTTTTAACA GTATTGATGA GATCATCTAT GTCTCCGACC TGTATACCTA TGAAGTACTG
TACATGAACG ATGCATTCCT GCGATTACTC AAAAAGGATG CAGTTGGTGG ACTCTGTTAT
CAGGAACTTC AGGGACTGGA TCATCCCTGT GAATTCTGCA CAAATGAGAT CCTTTTAAAA
AACAGGGATA AACCCTATCG GTGGGAATAC CATAACCCCT TCATCAATAG GGATTTTGAG
ATCGTCGATC GGGTTATTAC CTGGCCGGAT GGGCGGGATG TACGATTTGA ATTTGCCAAG
GATATCACCG AGCGGAAAGT GGCGGAGGAC GCACTCCTTG TTAAGAACCA GATCTTCGAG
ACCACTGTAG AAGGTGTATC TCTGATCCGG ACCTGCGACG AGGTGATCGT TTATACCAAT
TCAAAATTTG AAAAGATGTT TGGTTATGAA AAAGGAGAGT TAATCGGGAA CCATGTATCA
GTGGTCAATG CTCCTAACGA TGAAATGAGT CCCAGGAGTT CTGCAGAAGA GATCATGAAA
GCCCTCGATG AAATGGGTAA ATGGAGAGGG GAAGTAAAAA ACATCAGAAA AGATGACACC
ATAGTCTGGT GTTCTGTCGT CGTCTCCACG TTTGAACATC CTGATTTTGG AAGTGTCTGG
ATTTCTGCTC ATACTGACAT CACCGAGCGT AAGCAGGCTG AAGAGGCTGT TCAGACTGCT
GTAAAATTAA ACCAGTTGAT CGATACGATG TCGGTCAGTG AATGCATGAG TTTTACTCTC
GATGAAGCAG AACGACTGAC CTCAAGCAGG ATCGGCTTTT TTCATTTCGT CGATCCGGAT
GAACAGATGC TCCACCTGGT CACCTGGTCG ACAGAAACCC GAAAACACTG CTCTATCCCT
GAGGAACACG AGCAGAACTA TCCGGTTTCC AAAGCCGGCG TCTGGGTAGA TTGTCTCCGT
GAGCGTAAAC CGGTTATCCA CAATGATTAC ATCAGCCTCC CCCACAAAAA AGGCCTGTCT
AAAGCCCATA TTCCCGTGAC CCGGGAACTG GTTGTTCCGA TTTTCGATGA GGATACCATT
GTCGCAATCA TCGGTGTGGG CAACAAAACG ACAGATTATG ATGAGATGGA CATCGACGTG
CTGACCCTTC TTGCAAGCAA CGTATGGACG TTGATCCAGC GCAAGCGGGC GGAAGAGGCC
CTCAAAGAGA GCGAGCAGAA ATTCCGCGAG ATCTTCAATA ATGTCAATGA TGGAATTGAA
CTTTACGAGT TCAGGAGTGA CGATCTTCCC GGGAACTACC TGGAAGTGAA CGACGTCACC
TGCCGGATGC TCCAGTATTC CCGGGAAGAA CTCCTTCATC ATAGCCCACT CGATTTTATT
ACAGATTCAC ACAAATCCTC TTTGAGCGAT ATCAGGAAAG AATTAGTCAC CCTCGGACTT
TCACAGTTTG AAACGGAATA TCGGAGAAGA GACGGAACGA TAGTTCCCGT TGAAATAAAC
GCTCATATCG TTGTCCTCCA CGAAAAAAAT ATGCTCCTCT CCGTTGTCCG GGATATCACC
GAACGGAAGA AAATCGAGGA AGAAGAACGG TTGACACGCG AGCGGTTCGA GATGCTATTG
AAGGTTTCCG AGATGCAGGA TGCCAGCGAA ACGGACTTAT CCGAATATGT CATGGAAGTT
GCCTGCCGAA TGACTGGCAG CACGTTCGCA TTCATTGGGA TTATGACATC TGACGAATCG
GTGATGGATC TCATTTCGTG GTCGAGGTCA ACCATGCTGG ACTGCAAGGT TGCCGTATCG
CCGATTCATT TCCCGGTACA AAGAGCCGGC ATATGGGCGG ATGCAATACG GACGCACAAG
CCGAAGATCG TCAATCATTA TTCTGCACCT CATCCGGGCA AAAAAGGGTT ACCCGTGGGA
CATGTCAGGA TCACGCGGTT CCTCTCGCTC CCGATACTTG TCAATGGGAA GGTCGTTTTG
GTTGTAGCGG TTGCCAACAA ACTGTCAGAT TACGATGAAG CCGATGTCAC CCGATTGACA
CTCATGATGC AGGGTGTGTG GGGCAATCTC CAAAAAAGGA GATCAGATGA AGCACTCAAG
ATGAGCGAGG AGAAGTTTCG TGACATATTC AACAATACCT CTGATGCGAT GCATCTTCAT
CTGATCGGGG ACGCCGGGTC ACCCGGCAGA TTCACCGATA TCAACGATGT TGCCTGCCGG
ATGATTGGAT ATACCCGGGA AGAGATGCTT GCAAAAACCC CGCTCGAAAT CGCAGTTGAC
TATTACAACC CTTCCCTGGA AAAAAATATT GAAGAACAAC GAACCATTGA AAGTGCAAGA
TTTGAAACGG AGTATCGGAC AAAGGATGGA ATGCTCATCC CTGTCGAAGT CAACACCCAT
GTTGTCACCA TTCTGGGAAA AAAATTGATG CTCGGGACTG CCCGGGATAT CTCTGAGCGG
AAACGGGTTG AAGAGGCCCT GCAACTGGTC AATAAGAAGC TGAACCTGCT CTCAAGCATC
ACCCGTCATG ATATCAACAA CCAGATCTTC GCCTTGAAGG CATTCCTTGA ACTCTCAAAA
GAATCTCTTG ATGATTTCAC CATGACTTCG GAGTGTCTCT GCAAGGCGGA GCGAGCTGCA
AATGCCATTG AACGTCAGAT AGCCTTCACG AAGGAGTATC AGGATCTGGG GGTACATGCA
CCGGTCTGGC AGAGTGTGGA TGCAAGTATT ACTAAAGCGC TGACTGTGTT GCCCATGCGG
GACGTCCGGA TTGCTTCGGA GGTCAACGAT CTCGAAGTGT TTGCTGATCC GCTTTTTGAG
AAGGTGTTTT ATAATCTGAT CGATAATGCC CTGAAATACG GCGGGCAGAG GATGACTGTG
ATTCGGGTCT CCTCACAAAA ATCCAAAAGA GGACTGGTTA TTTCTGTTGA GAATGATGGG
GTAGGTATTT CAGCAGAGGA TAAAAAACGC CTCTTCGAGC GGGGCTTCGG GCACAATACC
GGCCTGGGTC TCTTCCTCTC CCGCGAGATC CTTGCAATTA CTGGCATCAC GATTACTGAA
GCCGGTGAAT CCGGTCAGTG TGCGAGGTTT GAGATGATCG TGCCGAAAGG AGGGTATCGA
TTTGTGTCCG AGGCATAA
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| Protein sequence | MTKKPFRNTQ EYFHAFIRTA QYIPNLTTRQ DILSETGSVL VNFFGADLIG FFEPGKDGEI
EGHHWVLPEG MPGTALLTRE TEMIVTGVLE TGFLAAQQID ITEPYATVFL PILWENQTAA
VMLIGHRTSD PIPKELLNIY LAVAGLVTNA LAGAYKGFKN IKARKRAEES LEYERKQLLS
LFNSIDEIIY VSDLYTYEVL YMNDAFLRLL KKDAVGGLCY QELQGLDHPC EFCTNEILLK
NRDKPYRWEY HNPFINRDFE IVDRVITWPD GRDVRFEFAK DITERKVAED ALLVKNQIFE
TTVEGVSLIR TCDEVIVYTN SKFEKMFGYE KGELIGNHVS VVNAPNDEMS PRSSAEEIMK
ALDEMGKWRG EVKNIRKDDT IVWCSVVVST FEHPDFGSVW ISAHTDITER KQAEEAVQTA
VKLNQLIDTM SVSECMSFTL DEAERLTSSR IGFFHFVDPD EQMLHLVTWS TETRKHCSIP
EEHEQNYPVS KAGVWVDCLR ERKPVIHNDY ISLPHKKGLS KAHIPVTREL VVPIFDEDTI
VAIIGVGNKT TDYDEMDIDV LTLLASNVWT LIQRKRAEEA LKESEQKFRE IFNNVNDGIE
LYEFRSDDLP GNYLEVNDVT CRMLQYSREE LLHHSPLDFI TDSHKSSLSD IRKELVTLGL
SQFETEYRRR DGTIVPVEIN AHIVVLHEKN MLLSVVRDIT ERKKIEEEER LTRERFEMLL
KVSEMQDASE TDLSEYVMEV ACRMTGSTFA FIGIMTSDES VMDLISWSRS TMLDCKVAVS
PIHFPVQRAG IWADAIRTHK PKIVNHYSAP HPGKKGLPVG HVRITRFLSL PILVNGKVVL
VVAVANKLSD YDEADVTRLT LMMQGVWGNL QKRRSDEALK MSEEKFRDIF NNTSDAMHLH
LIGDAGSPGR FTDINDVACR MIGYTREEML AKTPLEIAVD YYNPSLEKNI EEQRTIESAR
FETEYRTKDG MLIPVEVNTH VVTILGKKLM LGTARDISER KRVEEALQLV NKKLNLLSSI
TRHDINNQIF ALKAFLELSK ESLDDFTMTS ECLCKAERAA NAIERQIAFT KEYQDLGVHA
PVWQSVDASI TKALTVLPMR DVRIASEVND LEVFADPLFE KVFYNLIDNA LKYGGQRMTV
IRVSSQKSKR GLVISVENDG VGISAEDKKR LFERGFGHNT GLGLFLSREI LAITGITITE
AGESGQCARF EMIVPKGGYR FVSEA
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