Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1305 |
Symbol | |
ID | 7271165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1338595 |
End bp | 1339608 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643569939 |
Product | Uroporphyrinogen decarboxylase (URO-D) |
Protein accession | YP_002466362 |
Protein GI | 219851930 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.536887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA TTGAACGCAT CGTGTCAACG CTGAATTTTG AAAAACCAGA CCGGGTGCCG GTGATCGCAC AGGTCTTCGG TCATGCGGCA ACAGTAGCCG GCATGAATCT TGGTGAGTAT ATCAGGGATG GCGAACTGCT TGCACGGGGT CAGATCAGGG CCCTGGATCG GTACGGCTAT GATGCAGTCT TTGCCCTGAT GGACACGTCC GTGGAGACCG AAGCAGCTGG ATCTGTCCTG ACTTATTTTA AAAATAAATA TCCTATCGTC AAATCGTATG CTCTCTCGCA GGACACTGAT CCGGACAACC TATCAGTACC GGATCCGCAC CAGGCCGGGC GTATGCCGGC TCTCTTAAAC GCCGCAGGGA TCCTGCGGGA GGAGATCGGT GACGAGGTGC TGGTTGTCGG CTGTGTGCTG GGGCCTCTAA CCCTGGCAAC CCAGCTGCTC GGTATTGAAC AGGCTCTCTA TCTGGCAATC GATGATCCTG AACAGTTTGG CCGTGTGCTG GATTTCGCGA CAGACGTCGT TATCCGATTT GGTACAGCGC AGATCGAAGC GGGAGTGCAT CTACCAGTGG TTTTTGATCC ATCAGCTTCA CCAGCTGTGA TCCCCCCCAT GTTCTTTTAC GAGTTTGAGG TGCCACGGCT TACACGGTTA TTCTCATCCT TAAAAGAACA TGGCGCGGTA GCAAACTGGC TGCATATCGC CGGGTCTGTC GGCTCTATCC TTCCGTTTTA CCCGGAAGCC GGCGTTGATA TTGCAAATTT CGATTACTCT GTCAACCCGC TGGATGCTCA GGAAGCACTT CCCAGAACCG TTCTTGATGG TAACATCAGG CCATGGTCCT TTGTGGAGGC ACCACCTGAA GAGATCACAC GTGAATCGTC CCGACTCATG GACAGGTTCG CGCACCGTGG GGGTTTTATC CTGTCGTCAG GGTGTGAGAT TCCCCTGGAG TCCCGACAGG AGAATGTGAT GGCCCTGGTC ATGGCTGCCC GCACGAGGGG CTAG
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Protein sequence | MNSIERIVST LNFEKPDRVP VIAQVFGHAA TVAGMNLGEY IRDGELLARG QIRALDRYGY DAVFALMDTS VETEAAGSVL TYFKNKYPIV KSYALSQDTD PDNLSVPDPH QAGRMPALLN AAGILREEIG DEVLVVGCVL GPLTLATQLL GIEQALYLAI DDPEQFGRVL DFATDVVIRF GTAQIEAGVH LPVVFDPSAS PAVIPPMFFY EFEVPRLTRL FSSLKEHGAV ANWLHIAGSV GSILPFYPEA GVDIANFDYS VNPLDAQEAL PRTVLDGNIR PWSFVEAPPE EITRESSRLM DRFAHRGGFI LSSGCEIPLE SRQENVMALV MAARTRG
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