Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1297 |
Symbol | gatA |
ID | 7271157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1327924 |
End bp | 1329225 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643569931 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_002466354 |
Protein GI | 219851922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.911419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTG AACAGGAGGA CCAGTTCAAC GCGTTCATCA CCCGATGCAC GACCGATAGG GATAAATCGG ATCGGCAGAG GACCGGCCGG CTGGCCGGTC AGTACATCGC AGTCAAGGAT AACATCACCA CATCCGGGAT CATGACCACC TGCGGTTCTG CGATCCTGAA CGGATATATT CCCCCCTATG ATGCGCATGT GATCACCAAA ATAGTGAATG AAGGGGCGAT CATCGCAGGG AAGACCAATA TGGATGAGTT CGGGATGGGG ACCACGACAG AGAACAGTGC TTTTGGGCCG ACCAGGAATC CGGTGAACCC GGAACGGGTG CCCGGCGGTT CTTCCGGCGG CTCGGCAGCT GCGGTGGCGG CCGGTCTGGT GCCGATGGCG CTCGGGACCG ATACCGGCGG CTCGATTCGA TGTCCTGCTT CGTTCTGTGG AATCGTGGGG CTCAAACCCA CCTATAGTCG GGTCTCCCGG TACGGGCTGA TCGCCTATGC CAATTCGCTC GAACAGATCG GACCGATGGC ACGGACCGTG ACCGGGGTAT CGGACCTGAT GCAGGTGATC GCCGGGTATG ATTCCCGGGA CGCCACCTCC ACCGATCATC CCTACCATCA TACGCCCAGT GCAGATATCT CCGGAAAACG GATCGGGGTG CCGGAGGAGT TCTTCGGTAC AGGGGTCGAC GCCCACGTCG CCGAAACGGT CAGAAAGGCA ATCGACCGGC TGGAGGCCGG CGGGGCTGAG ATCGTCCCCT GCTCGATGAA GAGTATGGCC TATGCCCTGG CCGCCTATTA TGTGATCTGT ACCTCTGAGG CGAGTTCGAA CCTGGCCAGG TATGACGGCG TCAGGTACGG CGTTCCGGTC GATACCACAC CTCAGTGGCA CGACGCCTTT CGGGCGGTGC GTGGCGAAAG GTTCGGTCCG GAAGTGCAGC GCCGGATCCT GCTCGGCACC TTCGCCCTCT CTGCAGGCTA TTATGGAAAG TACTATGCCA AGGCGCAGAT CGCCAGGCAG CAGGTCCGGG CAGACTTCGA CCGGCTCTTT CAGGAGGTCG ATCTCCTTGC CGGGCCGACG ATGCCGACCG TGGCCTTCAG GCTCGGGGAG ATGGCAGATC CGCTCTCGAT GTACCTTGCG GACATCCTGA CGGTGCCGGC GAACCTGGCC GGGGTGCCGG CGATCTCGGT GCCCTGCGGC ACGGTCGACG GGATGCCGGT CGGTCTGCAG GTGATGGGGA GGCCGTTCGA TGACGAAGGG GTCGTGGACG CTGCCTATGC CTACGAACAG GGGGCGATCT GA
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Protein sequence | MAGEQEDQFN AFITRCTTDR DKSDRQRTGR LAGQYIAVKD NITTSGIMTT CGSAILNGYI PPYDAHVITK IVNEGAIIAG KTNMDEFGMG TTTENSAFGP TRNPVNPERV PGGSSGGSAA AVAAGLVPMA LGTDTGGSIR CPASFCGIVG LKPTYSRVSR YGLIAYANSL EQIGPMARTV TGVSDLMQVI AGYDSRDATS TDHPYHHTPS ADISGKRIGV PEEFFGTGVD AHVAETVRKA IDRLEAGGAE IVPCSMKSMA YALAAYYVIC TSEASSNLAR YDGVRYGVPV DTTPQWHDAF RAVRGERFGP EVQRRILLGT FALSAGYYGK YYAKAQIARQ QVRADFDRLF QEVDLLAGPT MPTVAFRLGE MADPLSMYLA DILTVPANLA GVPAISVPCG TVDGMPVGLQ VMGRPFDDEG VVDAAYAYEQ GAI
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