Gene Mpal_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1286 
Symbol 
ID7271146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1313823 
End bp1315271 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content57% 
IMG OID643569920 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_002466343 
Protein GI219851911 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.569108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG CGGGCTGTTC GAAGACTGGA AGCTCCACAG GAACACAGAC TATCACACCA 
GGATCTGGAA ATGGAACGGA TATCCAGACC ACGGTAACGC CAGGGGAGTC TGGCGGGCAA
CCGGCCTATA TGAAGGATCA GTCTTCGTAC TCGGTGCTCA GTTCAGGAAA CGCAAGTGGA
ACGGTCGGTC TGAAACAGGT TGCAGACGGG CTTACAGCCC CGATTGCGCT GGTCTCATCC
CATGATGACA CCGGCCGACT CTTCGCTGTC GACCAGACAG GCGTTGTTCG GATCATCGAC
AAGAACGGTG TCACGCTGCC GACCCCTTTC CTCGACCTTC GGGACCGAAT GGTCACGCTC
TCCCAAACCT ATGACGAGCG GGGACTGCTG GGCATTGCTT TTCATCCAGA TTACAAGAAC
AATGGCAGGA TCTTCGTATT CTATAGCGCC CCACTTCGTG ACGGGGGTCC GGACGGCTGG
AACTGTACCA ACCGTCTCTC TGAGTTCAAG GTCAGTTCAA CCGATCCAAA CCAGGTGGAT
ATGAGTTCAG AGCGGATCCT GCTGACGATC GATAAGCCGT CGATGAACCA CAACGGCGGT
CCGATCCTCT TCGGCCCTGA CGACGGCTAC CTGTACCTGA CGACCGGGGA CGGCGGCGGT
GCCAATGATG TCGGACTCGG TCACACGACA GGAACCGGGA ACGCTCAGGA TCTGAAAAGT
TTGCTCGGGA AGGTCCTCAG GATCGACGTA AACCAGAGAG ACGAGGGATT GATGTATGCA
ATTCCAAAGG ACAACCCCTT CGTCAACAAG GGGTGGGCAC TCCCGGAGAT CTATGCCTAC
GGCCTCCGCA ACCCGGCCTA TGCCACGTTC GACAGTGGGG ACGGGCATAC TCTGTTCATC
GGAGATGCCG GACAGCAACT CTTTGAATCC GTGTATCAGA TCAAGAAAGG CGGCAACTAT
GGCTGGAACC TCAAGGAGGG AACCCACTCC TTCAATCCCA GCCAACCCGG AACCCCGAAC
AGCACGGTAC CCACGGTTGG TTCCCGGGGT GAATCACTGA CCGATCCGAT CATCGAACTC
GGCCATGACC TCGGCCTGGT GGTCGTCGGT GGATATGTGT ACCGGGGGAC TGCGATCCCA
GGTCTCACCG GGAAATATCT CTTTGGTGAC TGGAGTGAAA GTTTTACGAT TGGAAACGGG
ACGCTGCTGC TTGGAACCCC ACCCGCGATC AATGGGACCG GCACCCAGAA CGGGATGTGG
TCGGTTGGCC TCGTGAACAT CTCGACCTCC CAGAATGGAC GGGTGAACGG TTTTGTCCGA
GGGTTTGGTG AGGACGACCA GCACGAGCTC TATCTCCTGA CCAGTCAGGC CAGCGGGCCT
TCCGGGACCA CCGGTAAGAT CTACCAGATC ACAGCCCCGA CCGCTGTGAA GACCCCAACA
ACCCCCTGA
 
Protein sequence
MAAAGCSKTG SSTGTQTITP GSGNGTDIQT TVTPGESGGQ PAYMKDQSSY SVLSSGNASG 
TVGLKQVADG LTAPIALVSS HDDTGRLFAV DQTGVVRIID KNGVTLPTPF LDLRDRMVTL
SQTYDERGLL GIAFHPDYKN NGRIFVFYSA PLRDGGPDGW NCTNRLSEFK VSSTDPNQVD
MSSERILLTI DKPSMNHNGG PILFGPDDGY LYLTTGDGGG ANDVGLGHTT GTGNAQDLKS
LLGKVLRIDV NQRDEGLMYA IPKDNPFVNK GWALPEIYAY GLRNPAYATF DSGDGHTLFI
GDAGQQLFES VYQIKKGGNY GWNLKEGTHS FNPSQPGTPN STVPTVGSRG ESLTDPIIEL
GHDLGLVVVG GYVYRGTAIP GLTGKYLFGD WSESFTIGNG TLLLGTPPAI NGTGTQNGMW
SVGLVNISTS QNGRVNGFVR GFGEDDQHEL YLLTSQASGP SGTTGKIYQI TAPTAVKTPT
TP