Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1286 |
Symbol | |
ID | 7271146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1313823 |
End bp | 1315271 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643569920 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_002466343 |
Protein GI | 219851911 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.185523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.569108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTG CGGGCTGTTC GAAGACTGGA AGCTCCACAG GAACACAGAC TATCACACCA GGATCTGGAA ATGGAACGGA TATCCAGACC ACGGTAACGC CAGGGGAGTC TGGCGGGCAA CCGGCCTATA TGAAGGATCA GTCTTCGTAC TCGGTGCTCA GTTCAGGAAA CGCAAGTGGA ACGGTCGGTC TGAAACAGGT TGCAGACGGG CTTACAGCCC CGATTGCGCT GGTCTCATCC CATGATGACA CCGGCCGACT CTTCGCTGTC GACCAGACAG GCGTTGTTCG GATCATCGAC AAGAACGGTG TCACGCTGCC GACCCCTTTC CTCGACCTTC GGGACCGAAT GGTCACGCTC TCCCAAACCT ATGACGAGCG GGGACTGCTG GGCATTGCTT TTCATCCAGA TTACAAGAAC AATGGCAGGA TCTTCGTATT CTATAGCGCC CCACTTCGTG ACGGGGGTCC GGACGGCTGG AACTGTACCA ACCGTCTCTC TGAGTTCAAG GTCAGTTCAA CCGATCCAAA CCAGGTGGAT ATGAGTTCAG AGCGGATCCT GCTGACGATC GATAAGCCGT CGATGAACCA CAACGGCGGT CCGATCCTCT TCGGCCCTGA CGACGGCTAC CTGTACCTGA CGACCGGGGA CGGCGGCGGT GCCAATGATG TCGGACTCGG TCACACGACA GGAACCGGGA ACGCTCAGGA TCTGAAAAGT TTGCTCGGGA AGGTCCTCAG GATCGACGTA AACCAGAGAG ACGAGGGATT GATGTATGCA ATTCCAAAGG ACAACCCCTT CGTCAACAAG GGGTGGGCAC TCCCGGAGAT CTATGCCTAC GGCCTCCGCA ACCCGGCCTA TGCCACGTTC GACAGTGGGG ACGGGCATAC TCTGTTCATC GGAGATGCCG GACAGCAACT CTTTGAATCC GTGTATCAGA TCAAGAAAGG CGGCAACTAT GGCTGGAACC TCAAGGAGGG AACCCACTCC TTCAATCCCA GCCAACCCGG AACCCCGAAC AGCACGGTAC CCACGGTTGG TTCCCGGGGT GAATCACTGA CCGATCCGAT CATCGAACTC GGCCATGACC TCGGCCTGGT GGTCGTCGGT GGATATGTGT ACCGGGGGAC TGCGATCCCA GGTCTCACCG GGAAATATCT CTTTGGTGAC TGGAGTGAAA GTTTTACGAT TGGAAACGGG ACGCTGCTGC TTGGAACCCC ACCCGCGATC AATGGGACCG GCACCCAGAA CGGGATGTGG TCGGTTGGCC TCGTGAACAT CTCGACCTCC CAGAATGGAC GGGTGAACGG TTTTGTCCGA GGGTTTGGTG AGGACGACCA GCACGAGCTC TATCTCCTGA CCAGTCAGGC CAGCGGGCCT TCCGGGACCA CCGGTAAGAT CTACCAGATC ACAGCCCCGA CCGCTGTGAA GACCCCAACA ACCCCCTGA
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Protein sequence | MAAAGCSKTG SSTGTQTITP GSGNGTDIQT TVTPGESGGQ PAYMKDQSSY SVLSSGNASG TVGLKQVADG LTAPIALVSS HDDTGRLFAV DQTGVVRIID KNGVTLPTPF LDLRDRMVTL SQTYDERGLL GIAFHPDYKN NGRIFVFYSA PLRDGGPDGW NCTNRLSEFK VSSTDPNQVD MSSERILLTI DKPSMNHNGG PILFGPDDGY LYLTTGDGGG ANDVGLGHTT GTGNAQDLKS LLGKVLRIDV NQRDEGLMYA IPKDNPFVNK GWALPEIYAY GLRNPAYATF DSGDGHTLFI GDAGQQLFES VYQIKKGGNY GWNLKEGTHS FNPSQPGTPN STVPTVGSRG ESLTDPIIEL GHDLGLVVVG GYVYRGTAIP GLTGKYLFGD WSESFTIGNG TLLLGTPPAI NGTGTQNGMW SVGLVNISTS QNGRVNGFVR GFGEDDQHEL YLLTSQASGP SGTTGKIYQI TAPTAVKTPT TP
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