| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1284 |
|---|
| Symbol | |
|---|
| ID | 7271144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1312616 |
|---|
| End bp | 1313014 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643569918 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466341 |
|---|
| Protein GI | 219851909 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1633] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0184871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.730412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGATT TTTCAAAACC ATTCAGTGGA AATATTCCGA ATCGAATGTT GACTCCAGAG
GAACTGATAC GGGCTCTCCG TCTGGACCTC GCCGCAGAGG AGGAGGCCAC CTTCCTGTAC
ATGGCCCATG CAGAGGCCAC CGATAATCCA CTTGCCAAGA AAGTATTGCT CGATATCGCG
AACGAGGAAC GGGTGCATGT CGGTGAACTC TCCCATCTGA TCCAGCTGTT GGCGGGAGAT
GAGGACACCT ATATGGCACG CGGGGCAGCG GAGGTCGACG CGATGGCAGC CGGGACTCCT
GGCGTTGTTT CGGCCCCGGC GGTAGCACCA CCGGTACCTG CCGGAACACC AGCCCCCGCA
CCAGTACAGC CGAAGACCAT AGGATCCCTG AAGATTTAG
|
|---|
| Protein sequence | MPDFSKPFSG NIPNRMLTPE ELIRALRLDL AAEEEATFLY MAHAEATDNP LAKKVLLDIA
NEERVHVGEL SHLIQLLAGD EDTYMARGAA EVDAMAAGTP GVVSAPAVAP PVPAGTPAPA
PVQPKTIGSL KI
|
|---|
| |