Gene Mpal_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1172 
Symbol 
ID7270439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1202856 
End bp1203722 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID643569807 
Producthistidine kinase 
Protein accessionYP_002466237 
Protein GI219851805 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAG GAAGAGTCCA GGGGACCTAT GCCGCAAAGA TCGGGAATTG CCGTTCCTGT 
GAGTTCTATC TGAGTGTACA GCGGGATATT CAGACACGTG ATCTTCCTCC ATCTGAACAC
CCGTCAAAGG TACTGGATCT TGTCCTGGAT CGGACTGCCG CTCTTGAACT GGAGATTGAA
CGGCGAATGC AGGTTGAGGC TACCCTCCGT CAGGTCAATT CAAAGTTAAA CCTCCTTTCA
AGCATTACCT GCCATGATAT GCTCAATAAA ATACATACTC TTGGTCTTCT CACCGACCTC
TTGAGTCAGA CATATTATCA GGATCCTGTC CTTCTGGGAT ACCTGCAAAC ACTTGATCAG
CAGATCCAAG ATCTGACGGA GATGATCGTA TTCACTCATG ACTATCAGGA TATCGGGGTC
CAGGCACCAA TCTGGCAGCA AATCCACCAG GTGATCGCTG GAGTTCAGGA ATTGGTTCAT
TCCGTTCCGA TAGAGGTGGA TCCTGGTCTT GGTTTGTATG AGATTTATGC GGATCCGCTC
ATTTCACGAG TATTTTATAA CCTTGTGGAT AATGCAATCC GCCATGGTGG GCAGGTGCAC
CAGATCCAGG TTTGCGGCGT GGAACTGGCA GAGGGGCTGG TTGTTGTCTG GGAGGATGAT
GGCGTGGGGG TTCTCCAAAC TGAGAAAGAG AAGATCTTCA AGAAAGGGCA TGGGAAGAAC
ACAGGGCTTG GGCTCTTCCT TGTCCGGGAG ATCCTGTCTA TCACCCGCAT TGAGATCCAG
GAAACCGGAA CATTTGGGGC AGGGGCGAGA TTTGAAATAA CCGTACCGAA GGATTCATAC
CGGCTTGTCA ATTCCGGATC AAATTGA
 
Protein sequence
MCEGRVQGTY AAKIGNCRSC EFYLSVQRDI QTRDLPPSEH PSKVLDLVLD RTAALELEIE 
RRMQVEATLR QVNSKLNLLS SITCHDMLNK IHTLGLLTDL LSQTYYQDPV LLGYLQTLDQ
QIQDLTEMIV FTHDYQDIGV QAPIWQQIHQ VIAGVQELVH SVPIEVDPGL GLYEIYADPL
ISRVFYNLVD NAIRHGGQVH QIQVCGVELA EGLVVVWEDD GVGVLQTEKE KIFKKGHGKN
TGLGLFLVRE ILSITRIEIQ ETGTFGAGAR FEITVPKDSY RLVNSGSN