Gene Mpal_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1114 
Symbol 
ID7271031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1148272 
End bp1148862 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID643569749 
Productprotein of unknown function DUF1254 
Protein accessionYP_002466182 
Protein GI219851750 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.807924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTCG AAGATCTGTT TATATTCAGT TCGGTCATGG TCGTGGCATG GTTCCTTTTC 
ATCTACAAAT GGCCAAGCCT GATTCTATAC GTGTACAAGA GAGCGATCCT CGTTAAAGGG
TTCGGCGAAG GCCCCATCCC CGTTAATACG CTCTATACGG AGCCCCAAAA ATTATTTGCA
GAGCCAATTA TTTCGCAATC TGCATCGGGC TCGAATTTGA TGACTGTTGG CGTGAACCAC
GACACGCTCC CTACAGTCGG CTGGCTCGAC CTCAGTAAAG GATCACAAGT CCTGCACGTT
CCGGATATGA ATGGCCGTTA CTACAGCGTG CAGTTCACGA ACCCGTCGAA CAACACCATT
TTTGCCTACG TCGGCAAACG CACCACGGGG ACCGAAGCCG GCGACTACCT CATCACAGGG
CCGAACTGGA AAGGACAGGT GCCGAGCGGC ATGAAACAGA TATCCTCGCC GAACCGCTCG
GTACTGGTCA TCGGTCGAGT GCTCGTGGAG AGCGACAACG ACCTACCGAC CGCCCATCAC
CTCGCAGAAC AAATACAGCT CACACCGCTA AACCAGAAGG GATCACTATG A
 
Protein sequence
MIFEDLFIFS SVMVVAWFLF IYKWPSLILY VYKRAILVKG FGEGPIPVNT LYTEPQKLFA 
EPIISQSASG SNLMTVGVNH DTLPTVGWLD LSKGSQVLHV PDMNGRYYSV QFTNPSNNTI
FAYVGKRTTG TEAGDYLITG PNWKGQVPSG MKQISSPNRS VLVIGRVLVE SDNDLPTAHH
LAEQIQLTPL NQKGSL