| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1042 |
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| Symbol | |
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| ID | 7271776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1071328 |
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| End bp | 1072494 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643569679 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_002466113 |
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| Protein GI | 219851681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA TGAAACCCTA TGATGTGGTG GTAGTCGGTG CCGGACCGGC AGGGACTGCA
GCGGCTGCAT CCTGTGCCGC AGCCGGCCTC TCAACGCTGG TGATTGAGGA ACACGGGACG
ATCGGGTATC CGGTCCAGTG TGCCGGTCTC CTCTCGGAGG CTGCCTTTGC CGAGTGCCGG
GTATCAGAAC GGCCGGTGCT GAACACGGTG CGTGGCGCCC GGATTGCTTC GGATCTTGGT
GGTTCACTCC TTTTTGATGC AGGAAAAACC AAGGCTTTCG TGGTCGATCG GGGTTTGCTC
GACCGTGAGA TGGCAGTCGC CGCCGCAGAT GCAGGGGCCG AGTTCATGCT GAAGACCGGG
TTCACCAGTA TATCGGGGGA CAGAGTCATG ACCTGTGGGA TCCATGGAGA ACAATCGATT
GGGTATCGCC TCCTGATAGG GGCCGACGGT CCGCGGTCGA TGGTGACACG ATCGCTCGGC
CTGCCCCGTG CTCAGACCTA TCTTTCAGGG ATTCAGGCAG ACCTCGCGGT GGCTGATCCG
GTTGACCCCA GGTTTGTCGA GATCTATCCG GACGCTTCTC CTGAGTTCTT TGGCTGGCAG
ATCCCGCTCG CACCCCGGAG GATCCGGGTC GGGCTCTGTG GAACCTGCGG GGTCAGAGAG
AAGTTTGAAC GATTCCAGGC ACGATTTCCG GGTTCGTGCC TGCATCTGGT TACCGGTACG
ATCCCGCTCG GTGTGATTGG GAAGACCTAT GGTAAACAGG CTCTGATCGT CGGAGATGCG
GCAGGGTTTG CAAAACCGAC CTCCGGTGGC GGGGTCTACA CTGGTATCCG TTCCGCCCGT
CTGGCTGCAG AGACTGCTAT CGCCTGTATT GAGGAGGGGC GGTTCGATGA CGCAGCCCTG
AGCAGGTATG AGAAGGCCTG GCAGGACGAT TTTGGAAAGG AACTGGCAGT CGGGTACAAA
CTGATCACCG CACGCCAAAA AATGACCAGC CTGGAGATCG ATCAGATTCT CCGGGCGATG
AACGACCCCT CGATCATCGA GTCGATCGTC AACTTTGGGG ATATGGACCG CCCCTCGGCG
CTGATCCGAA AACTGATGTT GAAACCCGCG CTCTGGGGGG CGATGAAGAT ACTGCTCAAT
TCAGGGATTC GACAGATCTT TGGGTGA
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| Protein sequence | MKMMKPYDVV VVGAGPAGTA AAASCAAAGL STLVIEEHGT IGYPVQCAGL LSEAAFAECR
VSERPVLNTV RGARIASDLG GSLLFDAGKT KAFVVDRGLL DREMAVAAAD AGAEFMLKTG
FTSISGDRVM TCGIHGEQSI GYRLLIGADG PRSMVTRSLG LPRAQTYLSG IQADLAVADP
VDPRFVEIYP DASPEFFGWQ IPLAPRRIRV GLCGTCGVRE KFERFQARFP GSCLHLVTGT
IPLGVIGKTY GKQALIVGDA AGFAKPTSGG GVYTGIRSAR LAAETAIACI EEGRFDDAAL
SRYEKAWQDD FGKELAVGYK LITARQKMTS LEIDQILRAM NDPSIIESIV NFGDMDRPSA
LIRKLMLKPA LWGAMKILLN SGIRQIFG
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