| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1040 |
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| Symbol | |
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| ID | 7271774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1069002 |
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| End bp | 1070654 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643569677 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002466111 |
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| Protein GI | 219851679 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGGA GAAGAGGTAC TGTGAGCGAT ACAATAGAGA AGATATCCAA TACTGATACG
CCGGCCGAAC CTGTTACCAA TGCATTCGAG GCACTGGGTA TCTCAAAAGA GATCCAGAGA
GCCATCGTTG ATCTCGGGTT CGAAGAGCCG ACCCCCATCC AGCAGATGGC GATCCCCCTG
ATTCATCAGG GATTTGATGT GATCGGCCAG GCCCAGACTG GGACTGGTAA AACGGCGGCT
TTTGGAATAC CAACGCTAGA GAAGATTGAT CCCCTGGATA AACATGTCCA GGCTCTGATT
CTCAGCCCAA CCCGTGAGTT GACCATCCAG ATCGCCGAGG AACTGAGCAA ACTGGCCCGT
TACCGACGCG GGATCGCGAT CCTACCGATC TATGGCGGTC AGCCTATCGA GCGGCAGTTC
GATGCTCTCA GACGGGGCGT TCAGGTCGTG ATCGGAACCC CAGGCAGGGT CATGGACCAT
ATGCGTAGGG GAACGCTGGT CTTCGACCAC GTGAAGACCG TGGTCCTCGA CGAAGCGGAC
GAGATGCTGG ATATGGGCTT CCGGGATGAT ATCGAACTGA TCCTCAAGAC GACGCCGTCA
GACCGGCAGA CCACGCTCTT TTCAGCTACG ATGTCGCAGC CGATCCTGGA ACTGACCAAG
CGGTTTCAGA AGAGCCCGAA GATGGTCAAG GTCACCCACA AGGAACTGAC GGTCGCGGCA
GTTGAACAGA TCTACTACGA GGTTCGCGAA TCGCTGAAGC TCGAGGCGCT GGCCCGCCTG
CTCGATATTT ACAATCCGAA ACTGACCCTG ATCTTCTGCA ACACCAAGCG GCGGGTCGAT
GAACTGGTCG GACAGTTACA GGTCAGGGGA TATGCTGCGG AGGCTCTCCA TGGAGACCTA
AAGCAGTCAC AGCGCGACCG GGTGATGGGC AGGTTCAGAT CCGGTGGGAT CGATATCCTG
GTCGCGACCG ATGTCGCAGC CCGTGGGATC GATGTCGACG ATATCGAGGC GGTCTTCAAC
TACGATATTC CGCAGGACGA GGAGTATTAT GTGCACCGGA TCGGCAGGAC CGGACGGGCC
GGCAGGACCG GGCGTGCGTT CACCTTCGTC TCGGGTAAGG AGATCTGGAA AATCCGGGAT
ATCCAGCGGT ACACCAACAC CCGCGTGATC CAGGCCCAGG TGCCGACCCT CTCGGATGTC
GAGGAGATCC GGACCACACT CTTCATCGAC AAGGTGAAGA CGATCGTCGA TGCAGGTGGG
CTTGAAAAGT ACGTCTCGAT GATCGAGAAA CTGATGCGTG ACGACTACGC TTCGCTTGAT
ATCGCAGCAG CACTGCTGAA GATGCGGATG GAGCGTGATA CCAAGGAGGA GACCGCCGCC
GAGCCGGACT TCAAGAATAC CGGTGCCGAG GCTGGCATGG TCAGGTTCTT CCTCAATGTC
GGCAGAAACC ACAATGTCCG GGCGAAGGAT ATCCTCGGTG CGATCGCTGG CGAGACCGGG
ATTCCTGGAA AGTCTATCGG TGCGATCAAC ATCTTTGACA GTTACTCGTT CGTCGAGGTG
CCGCTTGAGC ACGCAAAGAC GGTCTACCAG ATCATGAACA AGAACCAGAT CAAAGGGAAT
ACGATCAACA TCGAACCCGC AAACCAGCGG TAA
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| Protein sequence | MIRRRGTVSD TIEKISNTDT PAEPVTNAFE ALGISKEIQR AIVDLGFEEP TPIQQMAIPL
IHQGFDVIGQ AQTGTGKTAA FGIPTLEKID PLDKHVQALI LSPTRELTIQ IAEELSKLAR
YRRGIAILPI YGGQPIERQF DALRRGVQVV IGTPGRVMDH MRRGTLVFDH VKTVVLDEAD
EMLDMGFRDD IELILKTTPS DRQTTLFSAT MSQPILELTK RFQKSPKMVK VTHKELTVAA
VEQIYYEVRE SLKLEALARL LDIYNPKLTL IFCNTKRRVD ELVGQLQVRG YAAEALHGDL
KQSQRDRVMG RFRSGGIDIL VATDVAARGI DVDDIEAVFN YDIPQDEEYY VHRIGRTGRA
GRTGRAFTFV SGKEIWKIRD IQRYTNTRVI QAQVPTLSDV EEIRTTLFID KVKTIVDAGG
LEKYVSMIEK LMRDDYASLD IAAALLKMRM ERDTKEETAA EPDFKNTGAE AGMVRFFLNV
GRNHNVRAKD ILGAIAGETG IPGKSIGAIN IFDSYSFVEV PLEHAKTVYQ IMNKNQIKGN
TINIEPANQR
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