| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0987 |
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| Symbol | |
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| ID | 7271720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1015383 |
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| End bp | 1016300 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643569626 |
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| Product | ABC transporter related |
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| Protein accession | YP_002466061 |
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| Protein GI | 219851629 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.174355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGATCA TCGGCGCTGT TATTGTTGCA GAGGATCTGC TCAAAAAGTT TGGAGAGGCC
GTGGCTGTAG ACAGGATCTC GTTCACCGTG CAGGAGGGGG AGGTCTTTGG GGTGCTCGGA
CCCAACGGGG CCGGCAAGAC GACGACGATG CGGATGGTCG AATGCATCTC CCCACGGTCA
GGCGGGAACC TCTCGATCTT TGGGATGGAT CCGGTGAAGG ATCAGCGGCA GATCCGGGCA
ATGCTCGGAG TTGTCCCGCA GGAGAACAAC CTGGACGGCG AACTATCGGT CTATGACAAC
CTGCTGATGT ACTCCCGGTT CTTCGATATC CCGAAGAGAA AGGCTGCAGA ACGGGTCGAG
GAACTGCTCG ATTTCATGCA ACTGAAGGAG AAACGGGACA TGGTGATCGA GACTCTCTCG
GGGGGGATGA AACGGCGGCT GATCCTTGCC CGGGCGCTGG TCAACGAACC GAAACTGATC
GTCCTGGACG AACCGACCAC CGGTCTCGAC CCCCAGGCCC GGAACCTGAT CTGGGAGAAA
CTCCATACCC TGCAGAGAGA AGGGGTGACG ATCCTTCTCT CGACCCATTA CCTTGACGAG
GCCGCCCGAT TCTGTGATCG GCTGATCATC ATGCACCATG GCGGAATCCT GGTCGAAGGA
CCGCCTGCCT CGATCGTCAG CGCCTCCATG GGCAGTCATC TGGTCGAGAC CAGGGCCCTG
CCGGTTGTGC TCGCCTGTCT CGATCAGCAG GACCTGGTAT ACGACCAGGT CGGCGAGGCT
GTCTTCATCT CCACTGAGAA GCCCGACGAG GTAACCGGCC TGCTACTGGC TACCTGCGGT
CCGCTGGAGA TTGCCGTCCG GCGACCGACC CTTGAGGACG TCTTTCTGAA ACTGACCGGT
AGGGGGCTGG TGGATTGA
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| Protein sequence | MKIIGAVIVA EDLLKKFGEA VAVDRISFTV QEGEVFGVLG PNGAGKTTTM RMVECISPRS
GGNLSIFGMD PVKDQRQIRA MLGVVPQENN LDGELSVYDN LLMYSRFFDI PKRKAAERVE
ELLDFMQLKE KRDMVIETLS GGMKRRLILA RALVNEPKLI VLDEPTTGLD PQARNLIWEK
LHTLQREGVT ILLSTHYLDE AARFCDRLII MHHGGILVEG PPASIVSASM GSHLVETRAL
PVVLACLDQQ DLVYDQVGEA VFISTEKPDE VTGLLLATCG PLEIAVRRPT LEDVFLKLTG
RGLVD
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