Gene Mpal_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0932 
Symbol 
ID7272425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp963135 
End bp965396 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content56% 
IMG OID643569571 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002466007 
Protein GI219851575 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.20268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTG TACTCCTTGT TGACGATGAA CCCAATCTCC TGGACCTGAC CCAACTCTTT 
CTTGAACAGG ATCCCGAGAT CAGAGCAATC ACCTGCTCAT CCGCTTCCGA CGCCCTCAAA
CTTCTTACGG AACGGCAGTT CGACGCCATC GTATCGGACT ACGAGATGCC AGAGATCAAT
GGGATCGAAT TTTTGCAGAG ATTCCGACAG GCCGGAGGCA AGACCCCGTT CTGTATCTTC
ACCGGCAGGG GACGCGAACA TGTTGCGATC GATGCGCTGA ACTCAGGTGC AGACTTCTAT
CTGCAGAAGG GCGGCGACCC GAAGGCACAG TTTGCCGAAC TGAGGAACAT GGTCTGGCAG
TCGGTGAAGC GGTGGCAGGC CGAACTGGCA CTGTTAGAGA GCGAAGAGAA GTACAGGTTT
CTCGCAGATT ACTCACTCAA TGGCGTGATG ATCCAGGACT TTACAGGCAC GATCCTGTCC
GCGAACAGGA TGGCCACAGA GATGGTCGGA TTCGATGATC CTGCTGCGAT GATCGGAAGA
AACACCTTTG AGTTCATCGC TCCCGAGTCA CAGGGGCAGG TGATCGACGA TCTTTCGAAC
GTGCTGGCCG GGAAGAGCAG GTACGAGGCC CGGTACAGGC TGCAGACCTG CACCGGGAAG
AAGCGGTGGG TGAAGTCGAT CGGGACGATG ATCGAGTACC GGGGGAAACC AGCCAACATC
GTCTCTCTTC AGGACATCAC GGCAGAGGAG AATTATAAGG AGGCGGGTGT CCACTACGAA
GAGCAGTTTA CCAGACTCTT CTCCACCCAG AACGACCCGT GTCTGATCAC CCGGATTGGA
GAGGGGGACC AGGTACTGAT TGAAACGGGG AACCGGGCTG CAACGGAACT GCTTGGGTAT
ACCGAAGAGG AACTGCAGCA GATGCCCCTG CACCAGATCC TCCATACATC ACTGGACTTC
CAGAACCTGG GTGATGAGGA CCAGGCGAAT GGCGTGATAC TGCATCGAAA GGATGGCAAT
ATCGTCCATG CGTTATCGAT CGCTCATTCC ATCGTCCTGG AGAAGAAGCC GGCGACGATG
CTGGTTCTCC AAAAGACAGG GAGCAAATTC CCCTCGTTCA GTGCCAAGGG GAAGGATCTG
CATTACCAGG CGATGATGGA CTCGATCCTT GCCGGCGTAA TGCTGATCGA CGCAAAGGAT
CACCGGATTG TGGATATCAA TGCCGCAGCC GCCTGGATGA TCGGCACCCC CGCCGAGGAA
CTGATCGGGT CCCGCTGCCA GGATGCGATC TGCCCGGCCG AGAGGGGACG ATGCCCGATC
ACCGATCTGA AGATGATCAT GGACCGTTCT GAACGGGTGC TGATCACAGC TGACGGAACG
AGATGTTCGA TCCTGAAATC GGTCTCTCCA TTCTGGATTC AGGGTCATCA GTACCTCCTC
GAATCGTTCG TCGACATCAC CGACAGAGTC AAGGCCGAGC ATGCGATCAA CCAGGCGAAC
AAGAAACTGA ACATACTCTC CAGTGTGACC AGGCATGACA TCCTGAACCA GCTGACGGTG
CTTCGCGGAT ATCTGACGCT CACCGAGGAC GCAGCAGAGG ATGCCGGCAT CAGTGAGACG
ACCGGTCCCT ACCTTCGACA GATCGAGAAG GTAGCCCGGA CGATCCGGCT GCAGATCGAG
TTCACCAGGG ACTACCAGGA CATCGGGATA CAGGCGCCGG GATGGCACCG GATCGGCCTC
ATCCTCGATT ATGTGACATC AAGGCTCGAT TCAGGGAAAG TCGTAGTGGA GAATACCATC
GGGGGGCTCG AGATCTATGC AGATCCGCTG ATCACCGAGG TCTTCTACAA CCTGCTGGAC
AATGCCCTCA GGCATGCCAG ACTGTTGACC AGGATCACGG TCTCCTGCAG AGATGTTCCA
GAGGGGCTGA TCATCTCGGT ATCAGATGAT GGGAACGGGA TTCCTCTAAA AGAGAAGGAG
AAGATCTTTG AACGGGGGTT CGGGAAGAAT ACCGGGTACG GGCTCTTCAT CATCCGTGAC
ATCCTGGACA TCACCGGGAT CACCATCCAG GAGACCGGAA CCTTCGGCGA GGGGGCGCAG
TTCGATCTGT TGATCCCTGA AGGAGCGTTC AGATTCGTCG ATCATAAGGA TGAGGGTCAC
ACCATCCAGC CGGATCAGAG TGATATCCCG GGAACGCCAT ACAGATCAGA AAGGAGAGAG
ACCGAGCCCC GTTCAGAGCG GTCATCTCCA GAAGGGAAAT GA
 
Protein sequence
MITVLLVDDE PNLLDLTQLF LEQDPEIRAI TCSSASDALK LLTERQFDAI VSDYEMPEIN 
GIEFLQRFRQ AGGKTPFCIF TGRGREHVAI DALNSGADFY LQKGGDPKAQ FAELRNMVWQ
SVKRWQAELA LLESEEKYRF LADYSLNGVM IQDFTGTILS ANRMATEMVG FDDPAAMIGR
NTFEFIAPES QGQVIDDLSN VLAGKSRYEA RYRLQTCTGK KRWVKSIGTM IEYRGKPANI
VSLQDITAEE NYKEAGVHYE EQFTRLFSTQ NDPCLITRIG EGDQVLIETG NRAATELLGY
TEEELQQMPL HQILHTSLDF QNLGDEDQAN GVILHRKDGN IVHALSIAHS IVLEKKPATM
LVLQKTGSKF PSFSAKGKDL HYQAMMDSIL AGVMLIDAKD HRIVDINAAA AWMIGTPAEE
LIGSRCQDAI CPAERGRCPI TDLKMIMDRS ERVLITADGT RCSILKSVSP FWIQGHQYLL
ESFVDITDRV KAEHAINQAN KKLNILSSVT RHDILNQLTV LRGYLTLTED AAEDAGISET
TGPYLRQIEK VARTIRLQIE FTRDYQDIGI QAPGWHRIGL ILDYVTSRLD SGKVVVENTI
GGLEIYADPL ITEVFYNLLD NALRHARLLT RITVSCRDVP EGLIISVSDD GNGIPLKEKE
KIFERGFGKN TGYGLFIIRD ILDITGITIQ ETGTFGEGAQ FDLLIPEGAF RFVDHKDEGH
TIQPDQSDIP GTPYRSERRE TEPRSERSSP EGK