| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0926 |
|---|
| Symbol | |
|---|
| ID | 7272419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 957599 |
|---|
| End bp | 958516 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643569565 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466001 |
|---|
| Protein GI | 219851569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0906214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAC GAGTGGTGTG GGTGCCAGCG CTGGTGATCC TGGTGATCGG CCTGGTAGTG
GCAGGGTGCA TGACGTACCC GGTCAACAAC GCGGGATCCA GTGGAGCCAG TCCGCCGGTG
ACCGATGTAT ACGTCGGGAC GACCAGCGAT CAGAAAGCGG TGGCCCCGGT GTCGACGGCG
GCTTCGGATT CGGTCTCCAG CGCCAATACC GCGGAGACCG GTGTCGTGGT CGATCAGAAG
ATCGTCTATA CCGCCCAGGT GGGCCTGGAG GTGAAAGACG TCCTGACGGC CGTCGACACC
TTGAAGACCA TCGCGGCCGG GCGAGGGGGG TACCTCGCCT CGTCCAGTCT CACCACGCAG
GGCGAGACCC GCTCGGCGAA GGTCGTCTTC CGAGTGCCGG CCGCGGCGTT CGAGAACGCC
CTTGCTGACG TGAAGGCGGC CGGGAACGTC CAGTCCGTCT CACAGAGCGG CGAGGACGTG
ACCGCTGATT ACGTCGACCT CAACGCCCAG AAGACCTCCT ACCAGAACCA GCTGACGCAG
TACAACGAAC TGATGAAGAA GAGCGTGAAG GTGGAGGACA TCATCGCCGT GCAGGAGCAG
ATCGACCGGG TCCAGACCAA TCTGGACCGG CTGGAGGGAA GGCTGCGAGT CCTGAACAAC
CGGACCGCTC TCTCGACCAT CACGGTGAAC CTTAAAGAGC CGGCCCCGAT CGGCGGGAGT
TCCGGCAACA GCATCATCGA TACGATCAAT ACGGGGATCG CCGGGTTCTT CGGTATGATC
GAGTGGCTGA TCATCGCCTT TCTGACCCTG CTCCCCCTCT TCATCGTCGG GGGGGCAGTG
TACGGGGTCT ACCGGTGGCG CCGGTCGAAG AGAGGAGAGA TCCCTGTCGC CCCGGTGCAG
GAACCGCGGG AGAAGTGA
|
|---|
| Protein sequence | MDRRVVWVPA LVILVIGLVV AGCMTYPVNN AGSSGASPPV TDVYVGTTSD QKAVAPVSTA
ASDSVSSANT AETGVVVDQK IVYTAQVGLE VKDVLTAVDT LKTIAAGRGG YLASSSLTTQ
GETRSAKVVF RVPAAAFENA LADVKAAGNV QSVSQSGEDV TADYVDLNAQ KTSYQNQLTQ
YNELMKKSVK VEDIIAVQEQ IDRVQTNLDR LEGRLRVLNN RTALSTITVN LKEPAPIGGS
SGNSIIDTIN TGIAGFFGMI EWLIIAFLTL LPLFIVGGAV YGVYRWRRSK RGEIPVAPVQ
EPREK
|
|---|
| |