Gene Mpal_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0923 
Symbol 
ID7272416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp952978 
End bp953670 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID643569562 
ProductGntR domain protein 
Protein accessionYP_002465998 
Protein GI219851566 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0612567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0530485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTC AAAAAGCAAG CCGTTCCACC CTTGTCGGAC AAGTGGCGGA GCAGATGGAA 
CAGATGATTG AAAGCGGCCA GTGGCAAGTC GGAAAAAAGA TTCCCGCTGA GCCGGAATTG
ATGGGCCAGT TTGAGGTCAG CAGAAACACG CTGCGAGAGG CAATCCAGTC TTTAGTCCAT
GCCGGACTGC TAGAAACTCG GCAGGGTATC GGCACTACCG TAAAGTCAGA CAGTGACTTA
GGCGTTGTGC TGGAACGGAA AATTAAAAAG AGCGATCTTT TGGAAACTTT AGAAGTCCGT
TTGGGATTTG AGCGTGAGGC AGCCCAGCTT GCCGCTGAAC GAAGGACTGC GGAGGATCTG
GAACAGATTC AGTGTTGCCT TGATCAGTGT AAGCAAGCGT CTGAAAACAA CGATTTATTC
CAATTCGTTA AGATGGATAT TGCTTTTCAT AAATCCGTTG TGAAAGCTAC GCATAATGGA
ATGTTCATTG AGCTTTATGA ACATATCACC GATGCTTTAC AAAATTCCAT CAACGAAATT
ATGCGCATTA AAAATACGGT CCATGTTGAA AATGAAATTC ATATCGATCT TTTTCAAGCT
ATCCATTCGG GAGATCAACA ATTGGCTTTG GATTGTGTCA ATAAATATTT GAACGATGCA
AAGGAGTCGC TAAGCCTTAT GCTGAACGAG TAA
 
Protein sequence
MAIQKASRST LVGQVAEQME QMIESGQWQV GKKIPAEPEL MGQFEVSRNT LREAIQSLVH 
AGLLETRQGI GTTVKSDSDL GVVLERKIKK SDLLETLEVR LGFEREAAQL AAERRTAEDL
EQIQCCLDQC KQASENNDLF QFVKMDIAFH KSVVKATHNG MFIELYEHIT DALQNSINEI
MRIKNTVHVE NEIHIDLFQA IHSGDQQLAL DCVNKYLNDA KESLSLMLNE