| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0873 |
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| Symbol | |
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| ID | 7272363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 898134 |
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| End bp | 898781 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643569518 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_002465954 |
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| Protein GI | 219851522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00991598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGC AGAAGAGCGA TCAGATCTCC CGACCAGACA GGTCCACTGG TGATGAGCGT
CGCCATACCG GTAATCGACG CCGCGGTGAA ATTCTCGAAG CTGCAATACT TCAAGCTGCG
TGGGATGAAC TCTTTGATGG TGGCTATACC CATCTGACCA TGGAGGGAGT TGCTGCACGG
GCACGAACAA ATAAAGCAGT TTTGTATCGT CGCTGGGCCA ATAAGGCCAA ACTGGTCGCT
GCAGCAATAA GCAAACATGT GCCGAGACCT ACGGGTGATG TTCCAGACAC CGGCGATCTG
CGTAATGATG TATTGATCCT GCTTCACGGA ATAGCACAGC CCCTGCAAAT AATCGGTGCT
GAAACCATGC ACGGCCTCAT GGTCGAATAT CTGGATAAAG ATATGATCTC TTCATTTCCA
CAAAGAATGC ATCCGGGAAC CGAAAGCAGG TTGACAACAG CCATGATGAC GATTTTGAAA
AACGCTGATA CGCGAGGAGA GGTCAAACTG GATACGATCA GTCCTCGGGT TATTTCCCTG
CCCGCTGTTC TGCTGCAATA TGAAATCCTC ACCACCCATG AACCGATAGC CGATACAACG
ATCGATGAGA TCGTCGACGA CATATTTCTG CCACTTGTCA GGGCATGA
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| Protein sequence | MEEQKSDQIS RPDRSTGDER RHTGNRRRGE ILEAAILQAA WDELFDGGYT HLTMEGVAAR
ARTNKAVLYR RWANKAKLVA AAISKHVPRP TGDVPDTGDL RNDVLILLHG IAQPLQIIGA
ETMHGLMVEY LDKDMISSFP QRMHPGTESR LTTAMMTILK NADTRGEVKL DTISPRVISL
PAVLLQYEIL TTHEPIADTT IDEIVDDIFL PLVRA
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