| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0809 |
|---|
| Symbol | |
|---|
| ID | 7272299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 825139 |
|---|
| End bp | 827889 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643569458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465894 |
|---|
| Protein GI | 219851462 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3889] Predicted solute binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.455366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGC ATCGCATCAT AATCGCACTG ATTGCTGCAG TCCTTCTCAT TGGATTGACA
GGAGCAGCCA GTGCAACAAG CGTTGACATT GCTGCAATCA ATAGTCAGGA AAGGAATTCC
GCACAGTACT TCTGTGATGG ATCGAATGAT CAGATTGAGA TTCAGGCGGC TATCAATGCC
GTATCTTCAA ACGGTGGTGG GGATGTTCTT CTCCGTGACG GTACCTTCTC TATTTTGGGG
GATATCACAC TTCCCAATGG TGTGAATCTT ATCGGCAGGG GTGCAGGCAC AACAACTCTC
AAGTTTATCA GTGAGGGTTC GGTTCAGGTC AATGGAAATA ATTCCGTCCG GAACCTTCAG
TTAACAGGGC CGACTGGGTT CTTCATAACC GGCAGTCATG TCACGTTCAA CACCGTGACT
GTCAGAGACT ATTCCCTAAA GAGAGGTGCA TTCTATATTT ATGCGAATGA CCAGGCTCTG
AGTGACTTCG CCTTCACCAC CTGTCGTGCA TCCGATGGTT CGTCGAGTGG ATTTATCAAT
GCCGGCCAGG GATCATCGAG CAGTATATCT GGGGTTACCT ACACTGATTG CAGTGTGATC
AATGCGGGCC GGATGTCTCA GTTCGATCCG TGGGTAAGTG GTTTTGACCT CGCTGAGCTG
ACCACAATCA GCAATGTTCT GGTTCAGAAC TGTAAGGCAA ATGGTTGCTG GGAATCCGGG
TTCTACCTGG CAGATGGTGT GACTGCGAAC AATGTAATTA TCAGAGACTC CTCCAGCGTT
GACAACGGAC AGAAGAAGAC CCGTGATATC CCCGCTTCAG GTGCAGGGTT CTTTGGTGGC
AGTTCGACCA TGCAGTTCAT CAACTGTGTC TCGCAGGGCA ACCAGAACGG GTTCACCCTT
AAGACTGGAA CAACCATTAT CGGATGTAAG GACACTGGAT CAAAGAATGG ATTTGTAACG
ACAGAAAATT CAGAGATATT GATGGCCGAT TGCTGGTCTG ATAAGGCTCA GCAGTGGGCG
CTTCAGGCGC TCAGTTCCCA TGATGTGACC GCTACGAACT TTAAGGTCAC CAACCCGAGT
TCCAACCCGG CCCCGGCAAT TCTGGCGGGA AATACTGAAT ATCCATCCTA TAATATGAAT
ATTCAGATTG CTGGAAGTCC GGTATCAACA GCAGTTCCAA CCACTGTGTC AACTCCAGTA
CCGACTGCAA TTCCAACCAC TGTGTCAACT CCAATACCGA CTGCAATTCC AACCACTGTG
TCGACTCCAA TACCGACTGC AATTCCAACC ACTGTGTCGA CTCCAATACC GACTGCAATC
CCAACCACTG TGTCGACTCC AATACCGACT GCAATCCCAA CCACTGTGTC GACTCCAATA
CCGACTGCAA TCCCAACCAC TGTGTCGACT CCAATACCGA CTGCAATTCC AACCACTGTG
TCGACTCCAA TACCGACTGC AATCCCAACC ACTGTGTCGA CTCCAATACC AACTGCAATC
CCAACCACGG TGGCCACGAT CGGACCTGTC ACCAATGGTG TTGAAGCAGC AGCGTATGCG
AATGCCGCAT ACACTCAGGG GAATACTCGC CTCGCCCAGA TGCAGCAGGC CTATCGGGCA
TGGGTTGTTC CCTCTCGACC GGACCTCGTT AAGATTGCCA CGAATGTCAG GTCATCGGGG
CTGAAAGGCG ATGGTGTCAC CGACGATACT GCTGCCCTCC AGTCGCTCCT CACCAACCTC
CCATCCGGGT CGACGATCTA CTTCCCTCCC GGTCATTACC GGATCGATGG ACCCATCAGC
ATCAACAAAC CCTTCACCCT GTTCGGTGAA TCGGGAACCG TGTTCGACTG TGAAAAAGCG
ACACAGTATG TCTTCACCCT GAATGCCAAA GGCACGTCCG CATCGCCGAT GACGGGCATG
ACCATCACCG GAATCGTCTT TGAAGGTCCC GGGATTGAGA CAGACCCGGC GATGATTGAT
GCATATTATC TCCAGAACTT CCATGTATCC TATGTAAAGT TTCATAATAT CGGATATGCT
GCAATCCGCG TGAACACCTG CACTGATGTG ACGATTGAAA AGTCGATCTT CGATAACGTC
TTCCAGTCTG GACTGGGATA TGGGGTCAGC ATCACCGACC GCAGCGATCG AATATACATC
CATGACAACT TCTTTGTCAC CAAGGGAAGG CACAGTGTCA CAACCGGAAC CAGCCAAACC
GACCTGCCGG TGGCAGATTA TGTCCAGAGC GTCACGGTTG AGAACAATTA CTTCGAAAAT
ACGACAGAAG GAGCAATCGA CGCCCATAAA CCGACCACCG GTCCCTATGT CATAAAGGGT
AATGTCATGA ACAACTGTGT CAAAGGGGTA GAACTCGGCA GTGGTACGGC ACAGATCAGC
GACAATGTGA TCGTAAACTG CAAAGGTGGT GTTGTATTAA CAAACGTATA CGCCGACCCA
AATAATCTGC CAGCCAAAGT TGATCAGATT GTTGACAATA CCATGATCAA TATCCTCTAT
GAGGCCATAG ATGTCGACCG GACCAATATC CTGATTCAGG GAAATGTTGC GAAAGGCACG
GGTAACGGCG GGACTGGGAT CTACCTCGAA CCCTATGTCC CGAACGTCTG CAATATCAAC
GGGAATGTAA TAGAAAGTTA TGCTCGTGGA TTTCAGGCAA GTGCGCCCAG CTCAACAATT
TCACTGGTGA ACAACTTCCT CAAGAGCAGT GGAAGTTATC AGACCTTCTA A
|
|---|
| Protein sequence | MIKHRIIIAL IAAVLLIGLT GAASATSVDI AAINSQERNS AQYFCDGSND QIEIQAAINA
VSSNGGGDVL LRDGTFSILG DITLPNGVNL IGRGAGTTTL KFISEGSVQV NGNNSVRNLQ
LTGPTGFFIT GSHVTFNTVT VRDYSLKRGA FYIYANDQAL SDFAFTTCRA SDGSSSGFIN
AGQGSSSSIS GVTYTDCSVI NAGRMSQFDP WVSGFDLAEL TTISNVLVQN CKANGCWESG
FYLADGVTAN NVIIRDSSSV DNGQKKTRDI PASGAGFFGG SSTMQFINCV SQGNQNGFTL
KTGTTIIGCK DTGSKNGFVT TENSEILMAD CWSDKAQQWA LQALSSHDVT ATNFKVTNPS
SNPAPAILAG NTEYPSYNMN IQIAGSPVST AVPTTVSTPV PTAIPTTVST PIPTAIPTTV
STPIPTAIPT TVSTPIPTAI PTTVSTPIPT AIPTTVSTPI PTAIPTTVST PIPTAIPTTV
STPIPTAIPT TVSTPIPTAI PTTVATIGPV TNGVEAAAYA NAAYTQGNTR LAQMQQAYRA
WVVPSRPDLV KIATNVRSSG LKGDGVTDDT AALQSLLTNL PSGSTIYFPP GHYRIDGPIS
INKPFTLFGE SGTVFDCEKA TQYVFTLNAK GTSASPMTGM TITGIVFEGP GIETDPAMID
AYYLQNFHVS YVKFHNIGYA AIRVNTCTDV TIEKSIFDNV FQSGLGYGVS ITDRSDRIYI
HDNFFVTKGR HSVTTGTSQT DLPVADYVQS VTVENNYFEN TTEGAIDAHK PTTGPYVIKG
NVMNNCVKGV ELGSGTAQIS DNVIVNCKGG VVLTNVYADP NNLPAKVDQI VDNTMINILY
EAIDVDRTNI LIQGNVAKGT GNGGTGIYLE PYVPNVCNIN GNVIESYARG FQASAPSSTI
SLVNNFLKSS GSYQTF
|
|---|
| |