Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0779 |
Symbol | |
ID | 7270520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 794873 |
End bp | 795691 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643569427 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_002465864 |
Protein GI | 219851432 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0978373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00720502 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCTCTG ATGTGGTCAG TGTGGAGATT CCAGGCAACC GCGACGATGT CCTGAAGATC TTAAAGAGGA CCGGGATCAG TGGCGTTCCG GTGATCAAGG AAGGGCGTCT GATCGGGATC ATCACCCGGA AGGATCTGCT CAGAAAGCCA GACGAGACGC AACTCGGTCT GCTGATGACA CCCGACCCGA TCACGATCGG GCCCGGTGCA ACGATTCGGG ATGCCGCACG GCTGCTGGTC AAGCATAATA TCCGCAGGCT TCCGGTTGTT GAGGATGACT CCCTGATCGG GCTGATCAGT GTCTCAGACC TGATCCATGC GATTGCACAT ATGAAGATCA CTGACGTGAT CAAGGGGACC TATACGAGCC AGACCTTCGC GATCTGGGAA GAAACCCCCC TGACCGTCGT CGGCAAGGTG ATGGAGATCT CCGGGTTCGA TGCAATTCCG ATCCTCGATT CCGAGAATAC CCTCAAAGGG ATCATCTCTG AACGCGACCT GATCCGGTCG ACGGTGATCG AGGACAGTGT CGGGGTCAGC GACTTCTCCA ATGGAACTGA CGATGATGAG TGGACCTGGG AGAGTATCAG GGACAATCAT ACGCTCAGTT ACAGTATCAG CAAGGTGCAG CTGCCGAAGA AGGCGGTCAA GAACGCAATG GTGAAGAACG TCGTCGCTGT TCCTCTGAAT GCGGAGGTCA GCGAATGTGC CCTGAAGATG AAGCGGGCAC GTATCGACCA GCTCCCTGTG ATCAACGGGG ATAAAAGGCT CATTGCGATG CTTTTTGACC GTGAACTGAT AAAAGTGCTC TGTAATTAG
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Protein sequence | MTSDVVSVEI PGNRDDVLKI LKRTGISGVP VIKEGRLIGI ITRKDLLRKP DETQLGLLMT PDPITIGPGA TIRDAARLLV KHNIRRLPVV EDDSLIGLIS VSDLIHAIAH MKITDVIKGT YTSQTFAIWE ETPLTVVGKV MEISGFDAIP ILDSENTLKG IISERDLIRS TVIEDSVGVS DFSNGTDDDE WTWESIRDNH TLSYSISKVQ LPKKAVKNAM VKNVVAVPLN AEVSECALKM KRARIDQLPV INGDKRLIAM LFDRELIKVL CN
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