| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0739 |
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| Symbol | |
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| ID | 7270473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 738795 |
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| End bp | 741428 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643569382 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002465826 |
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| Protein GI | 219851394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000357401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCAA CCTATGCTCT GCTCCTCCTC GTTCTCGTTC TGGTCCTGGC CGCTCCGGTG
GCCGCAGCAC AGACGACCGA TGTGCAGGTG ATCCATTATG CAGGCGACGG CACGACAGTC
GCAAACCAGG AGACCGTGAA CGTCTCCTGG ATGGAGAGCA ACCTCCCCGT CTTCGGGGAT
GGAGCCACAC CCTACCTCCT CCAGGGGCCG ATGCTGAACA TCACCAACTA TAGCGATCCT
GCTAAGTGGA ACCCCGCCGA GGACACCAAC ATCGATAAGG TGGATGAGAT GATCAAGGGG
ACCAAACTCG TTGATCTCTG CAACCTCGTC GGCGGGATGC ATCCCGGCGA CGAGGTCAAG
ATCATCGCCT CAGACGGCTT CACCAAGACC TTCCCCTACG AAAACGTCTA CAACCCCCAG
GCCCGGCAGG GTCCGATGGT CCTCGCCTGG TGGACGGCCC GCCAGGGATA CGACTACTCT
GACGGGATCC GACTCTTCTT CGGTGCCGAC ACCTCGACGA ACCCGTGGGG GCTTCATGTC
TACGGTAACC AGGACATGAA GAATACCCTT GACGAGAAGT ACTGGGCCTG GTATGGCGGT
ACTGACGCCC TGCCGAATGC GGCGCAGCTC TCGAACAAGT GGATCGCGAA GGTCGAGATC
GTCCCGACGT CTTCAAGCAA CTGGACAAAC GCGACGACCG TCACCCCGAC CCCAACAGCC
ACGCTCAACT GGACAAACAC GACGACCGTC ACCCCGACCC CAACAGCCAC GCAGACCTCC
GGGCCGGTCG TCCTCTTCGA CGGCAACCTG ACGCTGACGG ACGGCACCTT CCCGGGCTAT
GCCTACAACT CGGGAGCGAC CCATCAGGTC CAGAACCTGA CCCCCCACGG GGCCCTGGAA
CTCGCCTCAA AGGCTGCTAA CTTCACCTAC GATGCAACCG ACAAGAAGTG GTCGACGCTG
GGCACCTTCA TGCTCGACAA CGCAGGCGGG TTCAATTACG ACAACTCTGC CGCGAAGAAG
GCCTGGGCAT ACCGGGTGAA CGGAGTCTGG AAGAACGACT TTTCCAGCAG CGAGGGGATC
AGCACCTATC GGCTCAACGA CGGCGATCTG GTCGAATACT ACTATGGCGT CAATGGCGGC
GCGTTCAAGG ACGCAGAGGC CGTGATCCGG ATACGCATCT CCATCCGGGA ACCGACGACG
ATCTTCGACG GGTCAGTGAC CCTGATGAAT GGAACCTTCC CGTTCTATGC CTACAACTCG
GGGACAACCC ATAACGTCGG AAACCTGACC GTCCAGGGGG CCCTTGAGGC AACAGCTGAG
AAGGGCGGGT TCACCTACAT CGCAACCGAT AAGAAGTGGA ACGATCTCGG CACGGTCCTG
CTCGATGGAG TCTCGACCTA TAACAAGACT CAGAACCTGA CGTGGGCCTA CACCCAAAAC
GGCGTCGTCA TGAACGATTT CTCGGCAAAC CAGGGGATCA GCGTCCAGCA GGTCAAAAAC
GGTGACAACC TCGTCTTCTA CTACGGGGTC AAGGGCGCCA GCCTCGACGC GGCGACGGCC
GTTGTCCGGA TTCGGGTCTT TGTCGCGAAC GACGTCAACT TCACGCTCAC GCTCAACGGT
GCACAATCGG CTACGTTCTC CAAGGCCGAC TTCGAAGCCT CCGGAAACCG GGTCGAATAC
ACCGACATCT CGGGCACCTG GTCGGGCATC CCGCTCTGGC GCCTCGTCGG ACTCGTCGAT
GACGGCGACC CCGCAACCTT CAACGACACG CTCGCGGCCC AGAATTACCA GGTGAAGATC
ACCGGCAGTG ATGGCTTTAA CCAGTCCCTG AACTCGAGCC TCATCGCACG GAACAACAAC
TGCATCGTCG TCGACCGGTT GAACGGAGTG CCGCTCGACG AGACGGGATG GCCGCTCCGC
CTCGTCGGGC CATCCATACC ATCCTACCTG TCAGTCCGGA TGATCACAAC CATCGACCTC
ATCGGTCTGA CACCAGAGAA GCCGACGGTC ACACCCACGT CACCCACGCT GACGCCGACA
CCGACAGTAC CCCCCACCAT CGGGGATTAT CCGGTGCCTG ACTTCACGCT GACCACCCCG
TCCCCGATGG AGATCATGAT CATCGATAAT ACAACGAATG CCACCTCGAT CAGGTACGAC
CTCGGCGACG GCACGAGCAC CGCCTACCGG AACTTCCGGT ATTACTACTG GGCACCCGGG
ACCTACACAA TCACGCTGAC CGCGACCAAT GCTGTCGGTA CCTCGGTGAA GACAGTCTCT
ATCACCGTGC CGGCAACCAC GCCAACCGTG ACAGCGACGA CAACAGTTCC CACACCCACG
CCCTCAGTCA CGCCGACCGA GCCGGTTACT GGCGCATCGT TCTCCGGTAT CCCCCAGGCG
ACATCATACG GGGAAGCAAT CAAATTCACC GTGACTCCAG CGGCCGGGAA GACGATCCGC
TCGACCTGGT GGACCTTTGA TAGAGTCAAT CACTATGGCA CCTGGAACTC GCGTGACATC
AACCCGACGT TCTTCTACCC TGCGAAGGGG ACCTACACGC CGCTCGTGAA GATCACCTAC
ACCGATGGAT CGACAGATAC CGTCGAGCTG GCGAACTACA TCACGGTCCA ATAG
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| Protein sequence | MRSTYALLLL VLVLVLAAPV AAAQTTDVQV IHYAGDGTTV ANQETVNVSW MESNLPVFGD
GATPYLLQGP MLNITNYSDP AKWNPAEDTN IDKVDEMIKG TKLVDLCNLV GGMHPGDEVK
IIASDGFTKT FPYENVYNPQ ARQGPMVLAW WTARQGYDYS DGIRLFFGAD TSTNPWGLHV
YGNQDMKNTL DEKYWAWYGG TDALPNAAQL SNKWIAKVEI VPTSSSNWTN ATTVTPTPTA
TLNWTNTTTV TPTPTATQTS GPVVLFDGNL TLTDGTFPGY AYNSGATHQV QNLTPHGALE
LASKAANFTY DATDKKWSTL GTFMLDNAGG FNYDNSAAKK AWAYRVNGVW KNDFSSSEGI
STYRLNDGDL VEYYYGVNGG AFKDAEAVIR IRISIREPTT IFDGSVTLMN GTFPFYAYNS
GTTHNVGNLT VQGALEATAE KGGFTYIATD KKWNDLGTVL LDGVSTYNKT QNLTWAYTQN
GVVMNDFSAN QGISVQQVKN GDNLVFYYGV KGASLDAATA VVRIRVFVAN DVNFTLTLNG
AQSATFSKAD FEASGNRVEY TDISGTWSGI PLWRLVGLVD DGDPATFNDT LAAQNYQVKI
TGSDGFNQSL NSSLIARNNN CIVVDRLNGV PLDETGWPLR LVGPSIPSYL SVRMITTIDL
IGLTPEKPTV TPTSPTLTPT PTVPPTIGDY PVPDFTLTTP SPMEIMIIDN TTNATSIRYD
LGDGTSTAYR NFRYYYWAPG TYTITLTATN AVGTSVKTVS ITVPATTPTV TATTTVPTPT
PSVTPTEPVT GASFSGIPQA TSYGEAIKFT VTPAAGKTIR STWWTFDRVN HYGTWNSRDI
NPTFFYPAKG TYTPLVKITY TDGSTDTVEL ANYITVQ
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