Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0722 |
Symbol | |
ID | 7271868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 719454 |
End bp | 719915 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643569367 |
Product | hypothetical protein |
Protein accession | YP_002465811 |
Protein GI | 219851379 |
COG category | [S] Function unknown |
COG ID | [COG4066] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00610528 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCT CAGATCTGTT ACTCCGGATT CAATCTGATC TTGAAGAGAT TTCCGGTTAC ACCTCCCGGA TAGCAGTGGA GATCCCGCTT CGGTCAGAAG AACCCTCGAC GATCATCAGC CGGCTTGCTG TGTATAATTA CCAGACCTAT CTCGAGATCC GATCTCTTTC TGGGATTGCA CCAGATTTTG AGATTGACGA GAAACGACTT GGTCAGATGT ACAGCGTTCT GGCTCACTAT CTGGATCGTT ATGCTCCGGG GAACGAGGAT CTCCATTGCT ATGTGACGGC GATCTCGATC TATCTCACCT TTATTGCGCA CAAACCACTG CATCCCCCGG GTTCCTTCTC CGAGGAGATT CAGATCGTTC GGCGGGGGTC CCTCTATTAC TGTAGCGGGA GACGGAAATT CATCCGGGAT AACCCCTCGC TCTGCCGGTT CTGTGTTTGC CAGCCGGCAT GA
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Protein sequence | MNGSDLLLRI QSDLEEISGY TSRIAVEIPL RSEEPSTIIS RLAVYNYQTY LEIRSLSGIA PDFEIDEKRL GQMYSVLAHY LDRYAPGNED LHCYVTAISI YLTFIAHKPL HPPGSFSEEI QIVRRGSLYY CSGRRKFIRD NPSLCRFCVC QPA
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