Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0677 |
Symbol | |
ID | 7271822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 673761 |
End bp | 674627 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643569322 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_002465767 |
Protein GI | 219851335 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.566486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCT ATCTCAATGG AGCATATGTC CCAAAGGAGG AGGCCAAGGT CTCTGTTTTC GATCACGGTC TTCTCTACGG AGACGGAGTC TTTGAGGGGA TCCGGGCGTA CAGCGGCCGG ATATTCCGCC TCGAGGAGCA CCTCGACCGG ATGTACGACT CGGCCAAGAC GATCGACCTT AAGGTTCCTA TCTCAAAGGA GGAGATGGCC GAGGCGATCA AGGAGACGAT CCGGAGGAAC AACCTCAAGG ACTGCTATAT CCGCCCGATC GTCACCCGTG GCAACGGGGA TCTCGGCCTC GACCCCCGGA AGTGTCCGGT TCCGACCGTG ATCGTCATTG CGGTCGAATG GGGAGCGATG TACGGCGATC TCTACGAAAA GGGGCTGACC GCGATCACGG TCTCGGTCCG GCGGAACTCG GCCGATGCGC TTCCGCCGAA CGTGAAGAGT CTGAACTACC TGAACAATAT TCTGGCCAAG ATCGAGGCCA ACTACAAGGG CGGCGATGAG GCGATCTTCT TCGACACCAA CGGCTACCTG GCCGAGGGGT CAGGGGACAA CATCTATGTC ATCAAAAACG GCGTGCTCTT CGTCCCGCCG ACCGTCAACA ACCTGCGCGG GGTCACCAGG CTCGTCGTGC TGGAACTGGC CGTCTCCCTC GGGTTCACGG TCAAGGAGCA GAACATGGGC TACTTCGATC TGTACACCGC CGACGAGGTC TTCGTCACCG GCACAGCCGC TGAGGTCGCT CCGATCGTGA CGATCGACGG CCGGTCGATC GGGAACGGGC GCCCCGGCCC GGTGACGTCC CAGATGATGA AGGCGTTCAC CGCTGTCACC GATAAAGAAG GAACTCCGGT CTACTGA
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Protein sequence | MIIYLNGAYV PKEEAKVSVF DHGLLYGDGV FEGIRAYSGR IFRLEEHLDR MYDSAKTIDL KVPISKEEMA EAIKETIRRN NLKDCYIRPI VTRGNGDLGL DPRKCPVPTV IVIAVEWGAM YGDLYEKGLT AITVSVRRNS ADALPPNVKS LNYLNNILAK IEANYKGGDE AIFFDTNGYL AEGSGDNIYV IKNGVLFVPP TVNNLRGVTR LVVLELAVSL GFTVKEQNMG YFDLYTADEV FVTGTAAEVA PIVTIDGRSI GNGRPGPVTS QMMKAFTAVT DKEGTPVY
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