Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0606 |
Symbol | |
ID | 7270193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 595286 |
End bp | 595708 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643569254 |
Product | putative transcriptional regulator, CopG family |
Protein accession | YP_002465700 |
Protein GI | 219851268 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATGG AAACAGAACT TTCACGGATC GGAATATCAC TTCCGAAGAA CTTGCTTGAT AAGTTCGATG AGATCATCAC GATCCGGGGA TACTCCTCGC GGTCAGAAGG GATCCGCGAT GCGATCAGGA ATTATATCAC CTATTACCGG TGGATGTCGG ATGTGAAGGG TGACCGGCAG GGAGTGATCA CGATGATCTA TGATCATGAT CAGCGGGGAC TCCTCCCGAC ACTGACCGAT ATCCAGCACG ATTTCATGGG GATCATCCAG GCCTCGCTCC ACTCCCATGT CTCGCATAAT CGGTGTCTTG AGGTGATCCT GGTCCATGGA GATGGAGCAC AACTCAAAGA TCTTGCAGAA CGGTTGATGT CTCAGAAAGG GGTTGAATCG GTGAAATTGA CCACGATCCC CATAGAAGAT TGA
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Protein sequence | MPMETELSRI GISLPKNLLD KFDEIITIRG YSSRSEGIRD AIRNYITYYR WMSDVKGDRQ GVITMIYDHD QRGLLPTLTD IQHDFMGIIQ ASLHSHVSHN RCLEVILVHG DGAQLKDLAE RLMSQKGVES VKLTTIPIED
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