| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0560 |
|---|
| Symbol | |
|---|
| ID | 7271976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 553466 |
|---|
| End bp | 553792 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643569207 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_002465656 |
|---|
| Protein GI | 219851224 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000121582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.190024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGA TCAGAGCGAT CGTAAGGCCC GAAAAGAAGG ACGAGGTGCT GGGGGAGTTA
TCATCTGCGG GATTCCATGC CGCGACCGTA GTGGATGTCG TGGGTCGTGG TAAGCAGAAA
GGGATCAAGA TCGGTGGGAT CGTCTATGAC GAGATCCCAA AGACCATGAT CCTGATGGCC
ATTCCAGATG AAGAGAAGGA CCAGGTCATC AACGTGATCC TAAAGACGGC CAAGACCAGT
GACAAGGGAG CATATGGGGA TGGCAAGATC TTCATCAGCC CCGTCGAAGA GGTCTACACG
ATATCAAAAG GCAGTCAGGG GTTGTAG
|
|---|
| Protein sequence | MLLIRAIVRP EKKDEVLGEL SSAGFHAATV VDVVGRGKQK GIKIGGIVYD EIPKTMILMA
IPDEEKDQVI NVILKTAKTS DKGAYGDGKI FISPVEEVYT ISKGSQGL
|
|---|
| |