Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0549 |
Symbol | |
ID | 7271965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 543390 |
End bp | 543950 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643569196 |
Product | Protein of unknown function DUF655 |
Protein accession | YP_002465645 |
Protein GI | 219851213 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1491] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.30809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.520711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCG ATAAGAAGGA GCTTAACGCA GTAGTGCTGG ACGTCCTCCT CAAAGGAAGT CCGGACGATC ACCGGTCAGG GTTCAAGCGT GAGCCATTGG TGATGGCCGT CGGTACCGAG CAGTTCAAAC TGCTCGAACT GGTGCCCAAG AAGGTGGAGA TCAACATCCA TGAGCGCATC TACATCGGTG ACGGCGAGCG CGAGAAGATC GAACGGGTGA AACGCCGTAT TTTTTATCAG GATCTATCTC AGGTAGCGAA GCTTGAACTT CCGTTTGTCG TCGAGAAACT GGTGCTCGAG AACGAACAGA TCTATGTCAA GTTCTTCAAC ACGTCCGTTC CGATCAGTTC GAAGTTACAT ATGCTTCACC TGCTCCCCGG CATCGGCAAG AAGCTGATGT GGGAGATCCT GGATGCCCGA GGGAAGAAGC CGTTTGAAAG TTTTGCTGAT ATTTCGCAGC GGATCAAAGG GATTCCCCAT CCGGAGATCA TGATCAAGAA TCGGATCCTC GAAGAGATCG AAGATCCTGA TGTGAAATAC CATATCTTCA CGTCGAAATG A
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Protein sequence | MKVDKKELNA VVLDVLLKGS PDDHRSGFKR EPLVMAVGTE QFKLLELVPK KVEINIHERI YIGDGEREKI ERVKRRIFYQ DLSQVAKLEL PFVVEKLVLE NEQIYVKFFN TSVPISSKLH MLHLLPGIGK KLMWEILDAR GKKPFESFAD ISQRIKGIPH PEIMIKNRIL EEIEDPDVKY HIFTSK
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