Gene Mpal_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0535 
Symbol 
ID7271951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp535219 
End bp535665 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID643569182 
Product30S ribosomal protein S19e 
Protein accessionYP_002465631 
Protein GI219851199 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000147139 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.911419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG TATACGATGT ACCGGCAGAT AAACTGATCA GAATGGTGGC AGAGGAGCTG 
AAGCAGCGCC CTGAGATCGC ACCACCTGCA TGGGCAGAGT TTGCCAAGAC TGGGGTCCAC
AAGGAGATGC CCCCCGAGGA TCCGGACTGG TGGTATACAC GCGCAGCAGC AGTGCTCAGG
CGCGTATATA TTGACGGACC GGTAGGTGTA GAGAGGATGC GCAGCTTTTA TGGCGGCAAG
AAAAACCGAG GAGCCAGACC CAATCAGTTT AGAAAGGGTA GTGGAGCGGT GATCCGGACA
CTCGTTCAGC AGCTTGAGGC CGCTGGACTT ATCGTTCGCG ACAAGGCGGG CCGAAAGGTC
TCCCCGGCAG GGATGTCGTT CCTTGACGGG ACAGCCTATG GTCTGGTCAG CAGTGCAGCC
GAAGGTACAT CTGGACAGAG CGAATAA
 
Protein sequence
MTTVYDVPAD KLIRMVAEEL KQRPEIAPPA WAEFAKTGVH KEMPPEDPDW WYTRAAAVLR 
RVYIDGPVGV ERMRSFYGGK KNRGARPNQF RKGSGAVIRT LVQQLEAAGL IVRDKAGRKV
SPAGMSFLDG TAYGLVSSAA EGTSGQSE